Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1666 ATGGGTTTCTTAGCTTCTCTCTTCAAACAGAGGGGTTTTATAATTTTCTTGAATCTCTCGTTTCTCTCAGTGGCTTGTGCCTTTTTGGCGATTCGATTTCACTCTCCAGAATCCCATTTCCATGTTCTTAACAAGAGCTTGAGAAAAATCCATGGCACTGCTCAGGAAGATTGCCAGAGTTTTCTTGGTCTAACTGACTTTGAAGCTAAGTGTTCTGTTCTTAAATCCAACAACCCTTGTAACACCCAAGGATATATAGATTATCTTTACATTTTCTATTGTCAATATGGAAGTTTTAGCCTCCTGGGCTACACTCTCTTGTTTCTGTGGCTTCTAGTGTTGTTCTATCTTTTGGGTAACACTGCTTCTGAATACTTTTGCTCTTCCCTTGAGAGCTTGTCAAAATTGTTGAATCTGTCCCCAACAATTGCTGGTGTTACTCTGCTTTCTCTTGGCAATGGGGCACCTGATGTTTTTGCCAGCCTTGTTGCCTTCATGGGGGATGGAACCAGTGATGTTGGCTTGAATACTGTTCTGGGCGGAGCCTCCTTTGTTACCTGCGTCGTCGTCGGAATCATAAGCATTTTGTTGCGTCGGCGACGAATTAAGGTGAATAGGTCTGCCTTCATTCGAGATGTTTTGTTCTTCCTCTTGGTTCTTTTATCTGTTTTCTCGATATTGCTTCATGGTCATATCAATCTGTGGGGTTCCATTGGCATTTCTTCCATGTATATTGTTTATGTTTTGGTTGTTTATATCTCCCATTCCCAATGGTTGAGTTTTAGAAGTGATATTTGCCAACCCCTTTTGAAAGAACCGCCAAAGGATGATTTTGAGGGTCCAAATGAATCAAGAGATGACAATGATGATGACGACAACGAAGATGTTAGAATTGATGTATATGATCTCTGTTTGTGTCCAAGATTATCACCTTCTTGTCTTGTTTTCCTTCACATTCTTGAGATCCCTCTTTACTTGCCTAGAAGATTGACAATTCCTGTCATTGCTGAAGAAAACTGGTCTAGACCATATGCAGTTGCTTCAGTGACATTAGCTCCCCTTCTCTTATCCCTTCTATGGGCATTTCACCACCAGAGCGGTACGTCTCAGTCGAACCTGATCATCTGCATCATTGCTTTCCTGCTCGGAATTAGTTTTGGAATTGTTGCATCTGCGACAACTGAGAATTCAAGCCCACCAAAGAAGTGGCTGTTCCCTTGGCTTGCAGCTGGCTTCACCATGAGTTTAACATGGAGTTATATTGTAGCTCAGGAACTGGTTGGCCTATTGGTTTCACTTGGCTACATAATGGGCATAAGCCCTTCAATCCTAGGACTTACCTTCCTGGCCTGGGGAAACTCTCTAGGGGATTTGGTTGCCAATGTCACCATGGCCTTGAACGGCGGGCAGCGAGGCGCCCAAATCGCCATCTCCGGCTGCTACGCTGGCCCCATCTTCAACACTCTGTTCGGCCTTGGGATGTCTCTCGTAGGCGCTTCGTGGAAGAAGTATCCTCAGCCGGTTGCCATCCCCCCTGACCCTTATGTCATGGAGACATTAGGGTTGTTGGTAGGAGGGTTGCTTTGGGCACTTGTGGCTTTGCCAAGGAGAGAGATGAGGCTTGATGCAGTCTTGGGAGGAGGCCTTCTGGCTATCTACTTGACCTCTTTGCTCTTAAGGCTGTTGCAAGCTTTTGGGTCTTCCCATTAG 1710 44.91 MGFLASLFKQRGFIIFLNLSFLSVACAFLAIRFHSPESHFHVLNKSLRKIHGTAQEDCQSFLGLTDFEAKCSVLKSNNPCNTQGYIDYLYIFYCQYGSFSLLGYTLLFLWLLVLFYLLGNTASEYFCSSLESLSKLLNLSPTIAGVTLLSLGNGAPDVFASLVAFMGDGTSDVGLNTVLGGASFVTCVVVGIISILLRRRRIKVNRSAFIRDVLFFLLVLLSVFSILLHGHINLWGSIGISSMYIVYVLVVYISHSQWLSFRSDICQPLLKEPPKDDFEGPNESRDDNDDDDNEDVRIDVYDLCLCPRLSPSCLVFLHILEIPLYLPRRLTIPVIAEENWSRPYAVASVTLAPLLLSLLWAFHHQSGTSQSNLIICIIAFLLGISFGIVASATTENSSPPKKWLFPWLAAGFTMSLTWSYIVAQELVGLLVSLGYIMGISPSILGLTFLAWGNSLGDLVANVTMALNGGQRGAQIAISGCYAGPIFNTLFGLGMSLVGASWKKYPQPVAIPPDPYVMETLGLLVGGLLWALVALPRREMRLDAVLGGGLLAIYLTSLLLRLLQAFGSSH 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35608903 35612192 - Tan0002271.1 Tan10g1666 766460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1666 569 Pfam Sodium/calcium exchanger protein 408 561 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Tan10g1666 569 Pfam Sodium/calcium exchanger protein 108 252 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Tan10g1666 569 MobiDBLite consensus disorder prediction 272 293 - -
Tan10g1666 569 Gene3D - 345 561 IPR044880 -
Tan10g1666 569 Gene3D - 139 261 IPR044880 -
Tan10g1666 569 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 24 567 IPR051359 GO:0006812(PANTHER)|GO:0008324(PANTHER)|GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0225 Tan-Chr9:14017848 Tan10g1666 Tan-Chr10:35608903 1.90E-47 dispersed
Tan09g0226 Tan-Chr9:14017848 Tan10g1666 Tan-Chr10:35608903 1.90E-47 dispersed
Tan09g1063 Tan-Chr9:62841972 Tan10g1666 Tan-Chr10:35608903 5.40E-113 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1666 K13754 - csv:101204766 917.146