Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1711 ATGGAGATGGAGCAGTTCAAGGTTTTGGCTCTGTGTTTCGTCTGTTTGATCTTGCTGGTTCGTCCACTATGGCTCGTTTCTGCTAACATGGAAGGTGATGCTTTGCATAGCCTAAGAACCAGCTTGCAGGATCCTAACAATGTCTTGCAGAGTTGGGATCCCACTCTTGTCAATCCCTGTACATGGTTTCACGTTACATGCAATAATGATAATAGTGTCATTAGAGTTGATCTTGGAAATGCAGCTTTATCAGGTACACTTGTTCCACAGCTTGGCTTGCTAAAAAATTTGCAGTATTTAGAGCTCTACAGTAATAACATAAGTGGAGTAATTCCTAGTGATCTTGGGAATCTGACTAGTTTGGTGAGCTTAGATCTTTATTTGAACCGTTTTTCGGGTCCGATTCCAGACACATTGGGCAAGCTGTCAAAACTGCGATTCCTCCGGCTGAACAACAACACCTTATCAGGTCCCATTCCTATGTCATTGACTAATATTTCATCCCTTCAAGTCTTGGATCTATCAAATAACATTCTCTCAGGCCCGGTTCCAGATAATGGTTCCTTCTCCTTGTTCACTCCCATCAGTTTTGCCAACAACTTGGATCTTTGTGGCCCTGTTACTGGACGTCCTTGCCCTGGATCTCCTCCATTTTCTCCTCCACCACCCTTTGTCCCACCACCACCTATATCTTCACCAGGGGGGAATAGTGCAACTGGAGCTATTGCTGGTGGAGTTGCTGCAGGCGCTGCTTTACTTTTTGCAGCTCCAGCAATTGCATTTGCATGGTGGCGTCGTAGGAAACCCCAGGAAGTTTTCTTCGACGTTCCTGCTGAAGAGGATCCTGAAGTGCACCTAGGACAGCTTAAACGATTTTCACTGAGAGAATTACAAGTGGCAACCGATAGTTTTAGTAACAAGAACATACTTGGTAGGGGTGGATTTGGCAAAGTCTATAAGGGTCGATTGGCAGACGGTTCTTTAGTAGCCGTAAAAAGACTCAAGGAAGAACGTACGCCTGGTGGAGAGCTGCAATTTCAAACAGAAGTAGAGATGATTAGCATGGCCGTGCATCGGAACCTACTACGACTACGTGGATTTTGCATGACTCCAACTGAACGACTTCTTGTTTACCCCTACATGGCCAATGGAAGTGTTGCGTCTTGTTTAAGAGAACGACCACCATCCCAACCACCTCTTGATTGGAGAACGAGGAAGCGAATTGCATTGGGATCTGCAAGAGGGCTATCTTATTTGCACGATCATTGTGATCCAAAGATCATTCACCGTGACGTAAAAGCTGCAAATATTTTGCTGGATGAGGAGTTTGAAGCCGTTGTAGGGGATTTCGGGTTGGCCAAACTTATGGATTACAAAGATACTCATGTCACCACTGCGGTACGTGGTACTATCGGACATATAGCTCCTGAGTACCTTTCAACTGGGAAATCTTCTGAGAAAACAGATGTTTTCGGGTACGGTATCATGCTTCTAGAGCTGATCACTGGACAAAGGGCTTTCGATTTGGCTCGACTTGCAAATGATGATGATGTGATGTTACTTGATTGGGTGAAAGGACTCCTGAAAGAGAAGAAGCTAGAAATGCTGGTTGATCCTGATCTTCAGAACAATTATGTAGAATCTGAGGTAGAACAGTTGATTCAGGTTGCTCTGCTCTGCACACAAGGCTCCCCGATGGACCGACCGAAGATGTCCGAGGTGGTGAGAATGCTCGAAGGTGACGGATTGGCAGAAAGATGGGACGAGTGGCAAAAGGTGGAAATCCTTCGGCAAGAAATCGATCTATCGCCTCATCCAAATTCCGATTGGATTGTGGATTCAACTGAAAATCTACATGCAGTTGAGCTTTCAGGTCCAAGATGA 1884 45.28 MEMEQFKVLALCFVCLILLVRPLWLVSANMEGDALHSLRTSLQDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGLLKNLQYLELYSNNISGVIPSDLGNLTSLVSLDLYLNRFSGPIPDTLGKLSKLRFLRLNNNTLSGPIPMSLTNISSLQVLDLSNNILSGPVPDNGSFSLFTPISFANNLDLCGPVTGRPCPGSPPFSPPPPFVPPPPISSPGGNSATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEVFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWRTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVESEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEILRQEIDLSPHPNSDWIVDSTENLHAVELSGPR 627
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 43391278 43399333 - Tan0018313.1 Tan10g1711 766505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1711 627 Pfam Protein tyrosine and serine/threonine kinase 307 578 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan10g1711 627 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Tan10g1711 627 SUPERFAMILY Protein kinase-like (PK-like) 283 579 IPR011009 -
Tan10g1711 627 FunFam Somatic embryogenesis receptor-like kinase 1 381 598 - -
Tan10g1711 627 SUPERFAMILY L domain-like 32 194 - -
Tan10g1711 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan10g1711 627 Pfam Leucine Rich Repeat 120 142 IPR001611 GO:0005515(InterPro)
Tan10g1711 627 Pfam Leucine Rich Repeat 144 165 IPR001611 GO:0005515(InterPro)
Tan10g1711 627 Pfam Leucine Rich Repeat 168 186 IPR001611 GO:0005515(InterPro)
Tan10g1711 627 Pfam Leucine Rich Repeat 96 118 IPR001611 GO:0005515(InterPro)
Tan10g1711 627 Gene3D Transferase(Phosphotransferase) domain 1 381 598 - -
Tan10g1711 627 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Tan10g1711 627 SMART serkin_6 304 578 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g1711 627 Gene3D Ribonuclease Inhibitor 27 214 IPR032675 -
Tan10g1711 627 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524(InterPro)
Tan10g1711 627 ProSiteProfiles Protein kinase domain profile. 304 591 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g1711 627 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 9 627 - -
Tan10g1711 627 FunFam Somatic embryogenesis receptor kinase 1 27 214 - -
Tan10g1711 627 CDD STK_BAK1_like 310 581 - -
Tan10g1711 627 FunFam Somatic embryogenesis receptor kinase 1 273 380 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0496 Tan-Chr1:4562267 Tan10g1711 Tan-Chr10:43391278 2.50E-221 dispersed
Tan01g0498 Tan-Chr1:4601760 Tan10g1711 Tan-Chr10:43391278 1.10E-219 dispersed
Tan01g0499 Tan-Chr1:4603783 Tan10g1711 Tan-Chr10:43391278 1.10E-189 dispersed
Tan01g1325 Tan-Chr1:13054956 Tan10g1711 Tan-Chr10:43391278 4.40E-245 dispersed
Tan02g1268 Tan-Chr2:34024371 Tan10g1711 Tan-Chr10:43391278 3.00E-169 dispersed
Tan05g0014 Tan-Chr5:220920 Tan10g1711 Tan-Chr10:43391278 8.20E-127 dispersed
Tan05g0015 Tan-Chr5:220920 Tan10g1711 Tan-Chr10:43391278 7.90E-127 dispersed
Tan05g0592 Tan-Chr5:4297106 Tan10g1711 Tan-Chr10:43391278 1.00E-55 dispersed
Tan05g0593 Tan-Chr5:4297106 Tan10g1711 Tan-Chr10:43391278 1.40E-69 dispersed
Tan05g2077 Tan-Chr5:71201561 Tan10g1711 Tan-Chr10:43391278 4.90E-76 dispersed
Tan06g1454 Tan-Chr6:19543578 Tan10g1711 Tan-Chr10:43391278 7.10E-28 dispersed
Tan09g0928 Tan-Chr9:61280282 Tan10g1711 Tan-Chr10:43391278 8.70E-31 dispersed
Tan09g2164 Tan-Chr9:71719720 Tan10g1711 Tan-Chr10:43391278 1.20E-69 dispersed
Tan10g1711 Tan-Chr10:43391278 Tan11g1616 Tan-Chr11:15754951 2.30E-137 dispersed
Tan10g1711 Tan-Chr10:43391278 Tan08g0167 Tan-Chr8:1415873 7.90E-77 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68155 PF00069 Pkinase 9.60E-45 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1711 K13418 - csv:101208695 1144.8