Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g1778 ATGTCGTCTCTAATTTCAAGGCTTCTTTCCCTCAGCTTTTGCTTTGCTCTGCTTTTTTTGAGCTCAAATTCAGAATTAGAAGACCATCGAAAGACTTATATTGTATACATGGGAAGTCATCCAAAAGACCAAATTTCTAGCCCATCTCATCATATGAGAATGCTACGAGAAGCTATTGGCAGCACTTTTGCTCCTCACTCTTTACTCCATAGCTATAAGAGAAGTTTTAATGGCTTCGTCGTGAAGCTGACTGAAGTCGAAGCACAAAAAGTTTCAGAAATGAAGGGTGTAATCTCAGTTTTTCCGAATGGAAGAAAACAACTCCACACAACAAGGTCGTGGGATTTCATGGGTTTGTCTCAACAAGCTAGTCGAGTTCCAACAGTAGAAAGTGACATCATCGTGGGAGTGTTTGATTCTGGCATCTGGCCAGAATCCCCTAGTTTTCTTGATCAAGGATATGGCCCACCGCCAACCAAGTGGAAGGGCAGTTGTGAAGTTTCAGCCAATTTCTCTTGCAACAATAAAATCGTTGGAGCTCGATCATATCGCAGCGATGGTGGGTATAGAGTAAATGATATGGAAGGACCAAGAGATTCAAATGGGCATGGGACACACACAGCGTCGACGGTGGCAGGCGGGTTGGTCGGGGGAGCGAGCATGGTCGGTCTCGGGTCGGGCACAGCAAGGGGAGGAGTTCCATCAGCGAGAATTGCTGCGTACAAAGTATGCTGGTTCGACGGTTGCAATGACGCAGACATCCTTGCTGCATTTGACGACGCCATTGCTGATGGGGTTGACATTATCTCCTTTTCTATTGGAGGAAGCATTCCAAGGGATTACTTCAATGACTCTATAGCTATTGGAGCTTTCCATGCAATGAAGAAGGGAATCCTCACGTCCATGTCCGCCGGCAACGACGGTCCAACCTTCTTCACTATTAGAAACTTCTCGCCTTGGTCTCTCTCAGTCGCGGCCAGTACTACTGATAGGAAATTTCTTACTGGAGTTCAACTTGGAGATGGAACAAGATTCAATGGAGTCACTATAAATACATTTGATCTAAATGGAACGCAATATCCGTTGGTTTATGCTGGAGATATACCAAATGTTATTGCTGGCTTCAATGGATCAAAATCCAGATTTTGCTTGGAAAACTCAGTGGACAGAGAGTTGGTAAAGGGTAAAATTGCCCTTTGTGATTTTATTGTATCTCCAAAGAAGGTCATGAGTTCTTTAAAAGGTGCAATTGGGATTATAATGCAAGACAGCACTCCAAAAGATCTCACATTCCCTTTTCCCTTGCCTGCTTCCCACCTTGGCAAACAAGAAGGAGCTCTCATTTCTTCTTATATCAACTTAAATAGTCTTCCAACAGCAACTATATTAAAGAGCATAGAAGGGAAGTATGAATCAACACCTTTTGTTGCATCTTTCTCTTCAAGGGGTCCAAATCCTGCAACTCTTGACATTCTCAAGCCGGATTTGACTGCCCCAGGAGTTGAAATTCTTGCAGCCTGGTCTCCAATAGGTCCACCTTCAGAAGCTGAGGATGATAATAGAAAGGTTCTTTATAATATAATTTCAGGGACTTCAATGTCTTGTCCACATGCCACAGCTGTGGCTGCATATGTTAAATCCTTCCACCCTTCTTGGTCTCCTGCTGCACTCAAATCAGCACTTATGACCACAGGTAATCAAAGTTTCATTTCATAA 1716 43.53 MSSLISRLLSLSFCFALLFLSSNSELEDHRKTYIVYMGSHPKDQISSPSHHMRMLREAIGSTFAPHSLLHSYKRSFNGFVVKLTEVEAQKVSEMKGVISVFPNGRKQLHTTRSWDFMGLSQQASRVPTVESDIIVGVFDSGIWPESPSFLDQGYGPPPTKWKGSCEVSANFSCNNKIVGARSYRSDGGYRVNDMEGPRDSNGHGTHTASTVAGGLVGGASMVGLGSGTARGGVPSARIAAYKVCWFDGCNDADILAAFDDAIADGVDIISFSIGGSIPRDYFNDSIAIGAFHAMKKGILTSMSAGNDGPTFFTIRNFSPWSLSVAASTTDRKFLTGVQLGDGTRFNGVTINTFDLNGTQYPLVYAGDIPNVIAGFNGSKSRFCLENSVDRELVKGKIALCDFIVSPKKVMSSLKGAIGIIMQDSTPKDLTFPFPLPASHLGKQEGALISSYINLNSLPTATILKSIEGKYESTPFVASFSSRGPNPATLDILKPDLTAPGVEILAAWSPIGPPSEAEDDNRKVLYNIISGTSMSCPHATAVAAYVKSFHPSWSPAALKSALMTTGNQSFIS 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 53828416 53838782 + Tan0006619.2 Tan10g1778 766572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g1778 571 CDD Peptidases_S8_3 106 564 IPR034197 -
Tan10g1778 571 CDD PA_subtilisin_like 337 462 - -
Tan10g1778 571 ProSitePatterns Serine proteases, subtilase family, serine active site. 530 540 IPR023828 -
Tan10g1778 571 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 109 IPR037045 -
Tan10g1778 571 Pfam Peptidase inhibitor I9 32 109 IPR010259 -
Tan10g1778 571 ProSiteProfiles Serine proteases, subtilase domain profile. 113 571 - -
Tan10g1778 571 Pfam Subtilase family 131 565 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan10g1778 571 Gene3D Peptidase S8/S53 domain 132 567 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan10g1778 571 Gene3D - 330 469 - -
Tan10g1778 571 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 567 IPR045051 -
Tan10g1778 571 SUPERFAMILY Subtilisin-like 116 566 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan10g1778 571 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Tan10g1778 571 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Tan10g1778 571 PRINTS Subtilisin serine protease family (S8) signature 199 212 IPR015500 -
Tan10g1778 571 FunFam Subtilisin-like protease SBT5.3 21 109 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan10g1778 Tan-Chr10:53828416 Tan10g1780 Tan-Chr10:53828416 5.70E-276 dispersed
Tan10g1777 Tan-Chr10:53828416 Tan10g1778 Tan-Chr10:53828416 0.00E+00 tandem
Tan10g1778 Tan-Chr10:53828416 Tan10g1779 Tan-Chr10:53828416 5.70E-276 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g1778 - - - 0.0