Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan10g1779 | ATGAAGGGTGTAATCTCAGTTTTTCCGAATGGAAGAAAACAACTCCACACAACAAGGTCGTGGGATTTCATGGGTTTGTCTCAACAAGCTAGTCGAGTTCCAACAGTAGAAAGTGACATCATCGTGGGAGTGTTTGATTCTGGCATCTGGCCAGAATCCCCTAGTTTTCTTGATCAAGGATATGGCCCACCGCCAACCAAGTGGAAGGGCAGTTGTGAAGTTTCAGCCAATTTCTCTTGCAACAATAAAATCGTTGGAGCTCGATCATATCGCAGCGATGGTGGGTATAGAGTAAATGATATGGAAGGACCAAGAGATTCAAATGGGCATGGGACACACACAGCGTCGACGGTGGCAGGCGGGTTGGTCGGGGGAGCGAGCATGGTCGGTCTCGGGTCGGGCACAGCAAGGGGAGGAGTTCCATCAGCGAGAATTGCTGCGTACAAAGTATGCTGGTTCGACGGTTGCAATGACGCAGACATCCTTGCTGCATTTGACGACGCCATTGCTGATGGGGTTGACATTATCTCCTTTTCTATTGGAGGAAGCATTCCAAGGGATTACTTCAATGACTCTATAGCTATTGGAGCTTTCCATGCAATGAAGAAGGGAATCCTCACGTCCATGTCCGCCGGCAACGACGGTCCAACCTTCTTCACTATTAGAAACTTCTCGCCTTGGTCTCTCTCAGTCGCGGCCAGTACTACTGATAGGAAATTTCTTACTGGAGTTCAACTTGGAGATGGAACAAGATTCAATGGAGTCACTATAAATACATTTGATCTAAATGGAACGCAATATCCGTTGGTTTATGCTGGAGATATACCAAATGTTATTGCTGGCTTCAATGGATCAAAATCCAGATTTTGCTTGGAAAACTCAGTGGACAGAGAGTTGGTAAAGGGTAAAATTGCCCTTTGTGATTTTATTGTATCTCCAAAGAAGGTCATGAGTTCTTTAAAAGGTGCAATTGGGATTATAATGCAAGACAGCACTCCAAAAGATCTCACATTCCCTTTTCCCTTGCCTGCTTCCCACCTTGGCAAACAAGAAGGAGCTCTCATTTCTTCTTATATCAACTTAAATAGTCTTCCAACAGCAACTATATTAAAGAGCATAGAAGGGAAGTATGAATCAACACCTTTTGTTGCATCTTTCTCTTCAAGGGGTCCAAATCCTGCAACTCTTGACATTCTCAAGCCGGATTTGACTGCCCCAGGAGTTGAAATTCTTGCAGCCTGGTCTCCAATAGGTCCACCTTCAGAAGCTGAGGATGATAATAGAAAGGTTCTTTATAATATAATTTCAGGGACTTCAATGTCTTGTCCACATGCCACAGCTGTGGCTGCATATGTTAAATCCTTCCACCCTTCTTGGTCTCCTGCTGCACTCAAATCAGCACTTATGACCACAGCATTTCCTATGAAAGTTGAACTTAACCCAGATGCAGAATTTGCATATGGTTCTGGCCATATAAATCCACTAAGCGCAGTGAATCCTGGATTAATCTATAACGCCACTGAAATTGACTATGTAAGATTTCTATGTGGTCAAGGTTATAGCACCAGATTGCTCCAACAAGTCTCTGAAGATAATACTACTTGTTCTTCAAACAATTTTGACACAGTGTTCGATCTAAACTATCCTTCATTTGCTCTTTCTACATCTATCTCAACTTCAATCACCCAAATTTACAAAAGAAGGGTTACAAATGTTGGGTCAACAAATTCTACATATAAAGCTACAATTTTGGCTCCCTTAGGGCTTAATATTACAGTGAACCCTTCTATTCTTTCATTCAAGGCTTTGGGAGAGGAGCAAAATTTTGAGCTTACAATTGAAGGAAGAATCAATAGTAGCATTGCATCGGCTTCCTTGGTATGGGATGATGGTGAACACAAAGTGAGGAGTCCTATTACAGTCTTTGATGCTAATACGTTCATTAATTAG | 1950 | 42.56 | MKGVISVFPNGRKQLHTTRSWDFMGLSQQASRVPTVESDIIVGVFDSGIWPESPSFLDQGYGPPPTKWKGSCEVSANFSCNNKIVGARSYRSDGGYRVNDMEGPRDSNGHGTHTASTVAGGLVGGASMVGLGSGTARGGVPSARIAAYKVCWFDGCNDADILAAFDDAIADGVDIISFSIGGSIPRDYFNDSIAIGAFHAMKKGILTSMSAGNDGPTFFTIRNFSPWSLSVAASTTDRKFLTGVQLGDGTRFNGVTINTFDLNGTQYPLVYAGDIPNVIAGFNGSKSRFCLENSVDRELVKGKIALCDFIVSPKKVMSSLKGAIGIIMQDSTPKDLTFPFPLPASHLGKQEGALISSYINLNSLPTATILKSIEGKYESTPFVASFSSRGPNPATLDILKPDLTAPGVEILAAWSPIGPPSEAEDDNRKVLYNIISGTSMSCPHATAVAAYVKSFHPSWSPAALKSALMTTAFPMKVELNPDAEFAYGSGHINPLSAVNPGLIYNATEIDYVRFLCGQGYSTRLLQQVSEDNTTCSSNNFDTVFDLNYPSFALSTSISTSITQIYKRRVTNVGSTNSTYKATILAPLGLNITVNPSILSFKALGEEQNFELTIEGRINSSIASASLVWDDGEHKVRSPITVFDANTFIN | 649 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 53828416 | 53839754 | + | Tan0006619.3 | Tan10g1779 | 766573 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan10g1779 | 649 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 437 | 447 | IPR023828 | - | |
Tan10g1779 | 649 | PRINTS | Subtilisin serine protease family (S8) signature | 37 | 56 | IPR015500 | - | |
Tan10g1779 | 649 | PRINTS | Subtilisin serine protease family (S8) signature | 106 | 119 | IPR015500 | - | |
Tan10g1779 | 649 | PRINTS | Subtilisin serine protease family (S8) signature | 436 | 452 | IPR015500 | - | |
Tan10g1779 | 649 | Pfam | Fibronectin type-III domain | 545 | 641 | IPR041469 | - | |
Tan10g1779 | 649 | CDD | Peptidases_S8_3 | 13 | 472 | IPR034197 | - | |
Tan10g1779 | 649 | Gene3D | - | 515 | 643 | - | - | |
Tan10g1779 | 649 | CDD | PA_subtilisin_like | 244 | 369 | - | - | |
Tan10g1779 | 649 | FunFam | Subtilisin-like protease SBT1.5 | 39 | 246 | - | - | |
Tan10g1779 | 649 | Pfam | Subtilase family | 38 | 488 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Tan10g1779 | 649 | Gene3D | Peptidase S8/S53 domain | 39 | 511 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Tan10g1779 | 649 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 2 | 639 | IPR045051 | - | |
Tan10g1779 | 649 | SUPERFAMILY | Subtilisin-like | 15 | 502 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Tan10g1779 | 649 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 20 | 498 | - | - | |
Tan10g1779 | 649 | Gene3D | - | 237 | 376 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan10g1777 | Tan-Chr10:53828416 | Tan10g1779 | Tan-Chr10:53828416 | 0.00E+00 | dispersed | |
Tan10g1778 | Tan-Chr10:53828416 | Tan10g1779 | Tan-Chr10:53828416 | 5.70E-276 | tandem | |
Tan10g1779 | Tan-Chr10:53828416 | Tan10g1780 | Tan-Chr10:53828416 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan10g1779 | - | - | - | 0.0 |