Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0002 ATGGACCAAGGAGATCGAATTGAAGAAAGTAGCTCCAGATTGCTGGGGGCCATTAGCGTTGCTGGCAGCAGTAATGATTTCAGGTGGGTTGACGGCAGTGAAGTGGACTCCGAGTCGCCTCCATGGTCGCTGTTTGAAGAAAGAGAAAGTGGGGAAGGATATGGATCTGTTAGAAGGAGGTTGGTTAAGAAGCCCAAGAGAGTTGATTCTTTTGATGTTGAAGCAATGGAAATTGCTGGTGCCAACCATCACCTTTTAAAGGATGTTTCAACTTGGCAAACTCTTGCTATAGCATTTCAAACGCTGGGCGTTGTATATGGTGACATGGGTACAAGCCCATTATACGTCTTTGCTGATGTATTCAGCAAGGTGCATATTGAGGCAGATGTTGACGTTCTGGGGGCTCTGTCCTTAGTGATTTACACAATTGCTCTTATTCCTTTGGCAAAATATGTTTTCGTAGTGCTCAGAGCCAACGACAATGGTGAAGGAGGAACATTTGCATTGTATTCACTGATCTGTAGGTATGCCAAAGTTAACATGCTGCCAAACCGTCAGCCTGCTGACGAACATATCTCAAGTTTTAAGCTCAAACTACCCACTCCAGAGCTGGAAAGGGCCTTACATATCAAAGAGACTCTGGAGAAGAGATCATCCTTGAAAACTCTTATATTGCTGCTGGTTCTGATGGGCACTTCAATGATTATTGGGGATGGTATTCTAACCCCAGCAATATCAGTCATGTCTGCTGTGAGTGGTCTGCAGGGACAGATAAAGTCATTCGATACAAATGCTGTTGTCATTGTTTCAATTATAATCCTTGTGGCCTTGTTCAGCATACAGAAATTTGGGACCGGGAAAGTAGGATTTATGTTTGCTCCTGTGCTAGCTTTGTGGTTTTTTAGTCTGGGATCAATTGGAATTTACAATCTAGTGAAGTATGATCTCACCGTTGTAAGGGCTCTCAATCCTGCTTACATCTATTTATTCTTCAAGAAAAATTCAAATAACGCATGGTCAGCTCTCGGTGGTTGTGTTTTGTGCGTAACAGGAGCTGAAGCAATGTTTGCTGATCTAGGCCATTTCACTGTGCCAGCCATACAGATTGCCTTCACATGTGTTGTTTTCCCCTGCCTTCTCTTGGCTTACATGGGCCAGGCTGCATACCTTATGAAACATCCAGATTCTGCAGCAAGAATATTTTATGATTCTGTGCCAGCAAGTCTTTTCTGGCCAATCTTTGTGACCGCTGCACTTGCTGCTATGATTGCGAGCCAAGCAATGATATCTGCAACCTTTTCTTGTGTCAAGCAATCTATGGCTCTTGGATGTTTTCCGAGAATGAAGATAGTTCACACCTCTAAGAGACGAATGGGTCAAATTTACATCCCCGTGATCAATTGGTTTTTGATGATAATGTGCATATTTGTCGTTGCAATATTCCGTAGGACTACAGACATCGCCAATGCTTATGGTATTGCTGAAGTTGGTGTGATGCTGGTGAGCACTGTCCTGGTGACTCTAGTAATGCTTCTGATCTGGCAGACAAATTTCTTTCTTGCGTTGTGTTTCCCACTTGTATTTGGGTCGGTGGAGTTTATCTACTTATCTGCAGTTTTATCAAAAATCAGCGAGGGTGGGTGGTTGCCCCTTGCTTTTGCTTCTGTCTTCCTCTCTGTGATGTACACATGGAACTATGGGAGTGTGTTGAAGTATCAAAGTGAGGTGAGAGAGAAGATTTCAATGGATTTCTTGCTTGAACTGGGATCTACCCTCGGAACTGTAAGAGTTCCAGGAATTGGTCTCCTCTACAATGAACTTGTCCAAGGCATTCCTGCAATTTTTGGACAATTTCTTCTTAGCCTTCCAGCCATCCACTCCACAATTGTGTTTGTGTGCATCAAATATGTTCCAATCCCTGTGGTTCCGCAAGAGGAAAGGTTTTTATTTAGGAGGGTTGGCCCAAAAGATTACCATATGTTTCGGTGCATTGCGAGGTATGGTTACAAGGATGTGCGGAAGGAAGATCATCATGCATTTGAGCAACTTTTGATGGAAAGCCTCGAGAAGTTCTTAAGAAAGGAGTCTCAAGATCTTGCCCTGGAGAGCAATTTAAATGAGTTGGAATTTGATAATATTTCAGATAGGTCACGGTATTCTCCAACTCCAGGTGTTGTTGATGTGAACGAGGAGTTGAGAATTCCGTTGATGGAAGAGGCGAGAACTTTGAGTTCGGAAGAAGCTCTCGGGGCGTTGTTGCCATCCAGCATTATGGCATCAGATGACGACCCTAGTTTGGAGTATGAGCTATCTGCCCTTCGAGAAGCAATGGATTCAGGATTTACATATCTAATGGCACAAGGAGATGTTCGAGCAAAGAAAAACTCATTTTTTATTAAGAAGCTTGTCATAAACTATTTCTATGCATTCCTAAGGAGGAACTGTAGAGGTGGTGCAGCGACAATGCGAGTTCCTCACATGAATATCATGCAAGTTGGGATGACTTACATGGTCTGA 2517 43.27 MDQGDRIEESSSRLLGAISVAGSSNDFRWVDGSEVDSESPPWSLFEERESGEGYGSVRRRLVKKPKRVDSFDVEAMEIAGANHHLLKDVSTWQTLAIAFQTLGVVYGDMGTSPLYVFADVFSKVHIEADVDVLGALSLVIYTIALIPLAKYVFVVLRANDNGEGGTFALYSLICRYAKVNMLPNRQPADEHISSFKLKLPTPELERALHIKETLEKRSSLKTLILLLVLMGTSMIIGDGILTPAISVMSAVSGLQGQIKSFDTNAVVIVSIIILVALFSIQKFGTGKVGFMFAPVLALWFFSLGSIGIYNLVKYDLTVVRALNPAYIYLFFKKNSNNAWSALGGCVLCVTGAEAMFADLGHFTVPAIQIAFTCVVFPCLLLAYMGQAAYLMKHPDSAARIFYDSVPASLFWPIFVTAALAAMIASQAMISATFSCVKQSMALGCFPRMKIVHTSKRRMGQIYIPVINWFLMIMCIFVVAIFRRTTDIANAYGIAEVGVMLVSTVLVTLVMLLIWQTNFFLALCFPLVFGSVEFIYLSAVLSKISEGGWLPLAFASVFLSVMYTWNYGSVLKYQSEVREKISMDFLLELGSTLGTVRVPGIGLLYNELVQGIPAIFGQFLLSLPAIHSTIVFVCIKYVPIPVVPQEERFLFRRVGPKDYHMFRCIARYGYKDVRKEDHHAFEQLLMESLEKFLRKESQDLALESNLNELEFDNISDRSRYSPTPGVVDVNEELRIPLMEEARTLSSEEALGALLPSSIMASDDDPSLEYELSALREAMDSGFTYLMAQGDVRAKKNSFFIKKLVINYFYAFLRRNCRGGAATMRVPHMNIMQVGMTYMV 838
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14632 38381 - Tan0010093.2 Tan11g0002 766939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0002 838 NCBIfam potassium uptake protein 97 838 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Tan11g0002 838 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 73 838 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Tan11g0002 838 Pfam K+ potassium transporter C-terminal domain 598 836 IPR053952 -
Tan11g0002 838 Pfam K+ potassium transporter integral membrane domain 98 586 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0510 Tan-Chr1:4666864 Tan11g0002 Tan-Chr11:14632 1.80E-257 dispersed
Tan10g1473 Tan-Chr10:21119255 Tan11g0002 Tan-Chr11:14632 5.40E-195 dispersed
Tan11g0002 Tan-Chr11:14632 Tan11g0608 Tan-Chr11:5393187 1.10E-182 dispersed
Tan11g0001 Tan-Chr11:14632 Tan11g0002 Tan-Chr11:14632 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0002 K03549 - csv:101202804 1487.24