Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g0073 | ATGATTGGTCAACAGAGTATGAGCTCTTCATCAACTCAACTCTATGCTTCAAGGATGGGCATCTATGAGCCATTTCACCAGATCAACTCATGGGGAAATGCCTTCAGTAGTCGACTAGATACAAGCATATCGCCTATTATAAAAGTGGACGACTGTGTAGACAATAAACCCGAGTTTATTCCTTTTGAATCGATGGATCATCTCGAGAGCAGTCAAGAAATGAACAAGCCAATTGACGATAAGGTACAAAGACGTTTAGCACAAAATCGAGAAGCAGCTCGTAAAAGCCGTATGAGGAAAAAGGTTTATGTGCAGCAGTTAGAAACTAGCCGTTTGAAGCTGGCACAGTTGGAGCAGGAGCTAGAAAGAACCAAGCAGAAGGGTGTATATACAAGCTGCATAGTAGATACCAGCCCCTTGGGATTCGGCGGATTGGTAAACCCAGGGATTGCTGCATTTGAGATGGAATACAATCACTGGGTTGAAGAGCAACAGAGACAGGTCACTGAACTCAGAAAGGCGCTGCAAGTTCATATAACCGATATCGAACTCCAAATTTTAGTGGAGAGCAGCTTAAACCATTACCACAACCTGTTTTGCATGAAGGCAAATGCTGCAAAGGCTGATGTATTCTATTTAATGTCTGGTGTATGGAGAACATCGGCAGAGCGATTTTTCCTCTGGATCGGAGGATTTCGCCCATCAGAGCTGCTAAATGTTCTCAAGCCATACTTTGAGCCATTAAACGAACAACAAAGAGCCGATATCCACAATTTGCAACAGTCGTCTCGGCAAGCTGAGGACGCTCTCTCACAGGGAATGGAAAAACTGCACCAGAATCTATCCCTCAGCATTGCCAATGACCCTCTAGGAAGCTATATTTCTCAGATGGGTGATGGGATGGAGAGACTAGAAGCATTGGAAAACTTTGTAAGCCAGCCGAGTGTGTGCTACTCTTTTCTTGAACAGGCAGACCATCTCAGGCAACAAACTTTGAAGAGAATGTCTCACATCCTAACCACCAAACAAGCAGCGCAAGGCTTGCTCGCTTTGGGTGAGTACTTCCATCGTCTTCGTGTTCTTAGTTCCCTCTGGGCCACTCGACCTCGCGAACCTGCCTAG | 1122 | 45.37 | MIGQQSMSSSSTQLYASRMGIYEPFHQINSWGNAFSSRLDTSISPIIKVDDCVDNKPEFIPFESMDHLESSQEMNKPIDDKVQRRLAQNREAARKSRMRKKVYVQQLETSRLKLAQLEQELERTKQKGVYTSCIVDTSPLGFGGLVNPGIAAFEMEYNHWVEEQQRQVTELRKALQVHITDIELQILVESSLNHYHNLFCMKANAAKADVFYLMSGVWRTSAERFFLWIGGFRPSELLNVLKPYFEPLNEQQRADIHNLQQSSRQAEDALSQGMEKLHQNLSLSIANDPLGSYISQMGDGMERLEALENFVSQPSVCYSFLEQADHLRQQTLKRMSHILTTKQAAQGLLALGEYFHRLRVLSSLWATRPREPA | 373 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 915203 | 919373 | - | Tan0013162.1 | Tan11g0073 | 767010 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g0073 | 373 | Pfam | Seed dormancy control | 167 | 242 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Tan11g0073 | 373 | SMART | brlzneu | 77 | 132 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g0073 | 373 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 84 | 99 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g0073 | 373 | ProSiteProfiles | DOG1 domain profile. | 150 | 368 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Tan11g0073 | 373 | Gene3D | - | 80 | 129 | - | - | |
Tan11g0073 | 373 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 79 | 123 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g0073 | 373 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 7 | 372 | - | - | |
Tan11g0073 | 373 | FunFam | BZIP family transcription factor | 80 | 129 | - | - | |
Tan11g0073 | 373 | SUPERFAMILY | Leucine zipper domain | 81 | 121 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g0073 | 373 | Pfam | bZIP transcription factor | 80 | 119 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan11g0073 | 373 | Coils | Coil | 249 | 269 | - | - | |
Tan11g0073 | 373 | Coils | Coil | 161 | 181 | - | - | |
Tan11g0073 | 373 | Coils | Coil | 100 | 127 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1335 | Tan-Chr1:13078261 | Tan11g0073 | Tan-Chr11:915203 | 9.30E-92 | dispersed | |
Tan11g0073 | Tan-Chr11:915203 | Tan11g0076 | Tan-Chr11:915203 | 2.70E-210 | dispersed | |
Tan11g0073 | Tan-Chr11:915203 | Tan11g0074 | Tan-Chr11:915203 | 2.70E-210 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28634 | PF14144 | DOG1 | 1.10E-28 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g0073 | K14431 | - | csv:101217648 | 684.485 |