Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0073 ATGATTGGTCAACAGAGTATGAGCTCTTCATCAACTCAACTCTATGCTTCAAGGATGGGCATCTATGAGCCATTTCACCAGATCAACTCATGGGGAAATGCCTTCAGTAGTCGACTAGATACAAGCATATCGCCTATTATAAAAGTGGACGACTGTGTAGACAATAAACCCGAGTTTATTCCTTTTGAATCGATGGATCATCTCGAGAGCAGTCAAGAAATGAACAAGCCAATTGACGATAAGGTACAAAGACGTTTAGCACAAAATCGAGAAGCAGCTCGTAAAAGCCGTATGAGGAAAAAGGTTTATGTGCAGCAGTTAGAAACTAGCCGTTTGAAGCTGGCACAGTTGGAGCAGGAGCTAGAAAGAACCAAGCAGAAGGGTGTATATACAAGCTGCATAGTAGATACCAGCCCCTTGGGATTCGGCGGATTGGTAAACCCAGGGATTGCTGCATTTGAGATGGAATACAATCACTGGGTTGAAGAGCAACAGAGACAGGTCACTGAACTCAGAAAGGCGCTGCAAGTTCATATAACCGATATCGAACTCCAAATTTTAGTGGAGAGCAGCTTAAACCATTACCACAACCTGTTTTGCATGAAGGCAAATGCTGCAAAGGCTGATGTATTCTATTTAATGTCTGGTGTATGGAGAACATCGGCAGAGCGATTTTTCCTCTGGATCGGAGGATTTCGCCCATCAGAGCTGCTAAATGTTCTCAAGCCATACTTTGAGCCATTAAACGAACAACAAAGAGCCGATATCCACAATTTGCAACAGTCGTCTCGGCAAGCTGAGGACGCTCTCTCACAGGGAATGGAAAAACTGCACCAGAATCTATCCCTCAGCATTGCCAATGACCCTCTAGGAAGCTATATTTCTCAGATGGGTGATGGGATGGAGAGACTAGAAGCATTGGAAAACTTTGTAAGCCAGCCGAGTGTGTGCTACTCTTTTCTTGAACAGGCAGACCATCTCAGGCAACAAACTTTGAAGAGAATGTCTCACATCCTAACCACCAAACAAGCAGCGCAAGGCTTGCTCGCTTTGGGTGAGTACTTCCATCGTCTTCGTGTTCTTAGTTCCCTCTGGGCCACTCGACCTCGCGAACCTGCCTAG 1122 45.37 MIGQQSMSSSSTQLYASRMGIYEPFHQINSWGNAFSSRLDTSISPIIKVDDCVDNKPEFIPFESMDHLESSQEMNKPIDDKVQRRLAQNREAARKSRMRKKVYVQQLETSRLKLAQLEQELERTKQKGVYTSCIVDTSPLGFGGLVNPGIAAFEMEYNHWVEEQQRQVTELRKALQVHITDIELQILVESSLNHYHNLFCMKANAAKADVFYLMSGVWRTSAERFFLWIGGFRPSELLNVLKPYFEPLNEQQRADIHNLQQSSRQAEDALSQGMEKLHQNLSLSIANDPLGSYISQMGDGMERLEALENFVSQPSVCYSFLEQADHLRQQTLKRMSHILTTKQAAQGLLALGEYFHRLRVLSSLWATRPREPA 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 915203 919373 - Tan0013162.1 Tan11g0073 767010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0073 373 Pfam Seed dormancy control 167 242 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Tan11g0073 373 SMART brlzneu 77 132 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g0073 373 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 84 99 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g0073 373 ProSiteProfiles DOG1 domain profile. 150 368 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Tan11g0073 373 Gene3D - 80 129 - -
Tan11g0073 373 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 79 123 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g0073 373 PANTHER TRANSCRIPTION FACTOR TGA9 7 372 - -
Tan11g0073 373 FunFam BZIP family transcription factor 80 129 - -
Tan11g0073 373 SUPERFAMILY Leucine zipper domain 81 121 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g0073 373 Pfam bZIP transcription factor 80 119 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g0073 373 Coils Coil 249 269 - -
Tan11g0073 373 Coils Coil 161 181 - -
Tan11g0073 373 Coils Coil 100 127 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1335 Tan-Chr1:13078261 Tan11g0073 Tan-Chr11:915203 9.30E-92 dispersed
Tan11g0073 Tan-Chr11:915203 Tan11g0076 Tan-Chr11:915203 2.70E-210 dispersed
Tan11g0073 Tan-Chr11:915203 Tan11g0074 Tan-Chr11:915203 2.70E-210 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28634 PF14144 DOG1 1.10E-28 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0073 K14431 - csv:101217648 684.485