Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0079 ATGGCGACGTCGCCGGAAATAGAGGCGTGGGTCCATTTTACTCTTATGATTGGTCAACAGAGTATGAGCTCTTCATCAACTCAACTCTATGCTTCAAGGATGGGCATCTATGAGCCATTTCACCAGATCAACTCATGGGGAAATGCCTTCAGTAGTCGACTAGATACAAGCATATCGCCTATTATAAAAGTGGACGACTGTGTAGACAATAAACCCGAGTTTATTCCTTTTGAATCGATGGATCATCTCGAGAGCAGTCAAGAAATGAACAAGCCAATTGACGATAAGGTACAAAGACGTTTAGCACAAAATCGAGAAGCAGCTCGTAAAAGCCGTATGAGGAAAAAGGTTTATGTGCAGCAGTTAGAAACTAGCCGTTTGAAGCTGGCACAGTTGGAGCAGGAGCTAGAAAGAACCAAGCAGAAGGGTGTATATACAAGCTGCATAGTAGATACCAGCCCCTTGGGATTCGGCGGATTGGTAAACCCAGGGATTGCTGCATTTGAGATGGAATACAATCACTGGGTTGAAGAGCAACAGAGACAGGTCACTGAACTCAGAAAGGCGCTGCAAGTTCATATAACCGATATCGAACTCCAAATTTTAGTGGAGAGCAGCTTAAACCATTACCACAACCTGTTTTGCATGAAGGCAAATGCTGCAAAGGCTGATGTATTCTATTTAATGTCTGGTGTATGGAGAACATCGGCAGAGCGATTTTTCCTCTGGATCGGAGGATTTCGCCCATCAGAGCTGCTAAATGTTCTCAAGCCATACTTTGAGCCATTAAACGAACAACAAAGAGCCGATATCCACAATTTGCAACAGTCGTCTCGGCAAGCTGAGGACGCTCTCTCACAGGGAATGGAAAAACTGCACCAGAATCTATCCCTCAGCATTGCCAATGACCCTCTAGGAAGCTATATTTCTCAGATGGGTGATGGGATGGAGAGACTAGAAGCATTGGAAAACTTTGTAAGCCAGCCGAGTGTGTGCTACTCTTTTCTTGAACAGGCAGACCATCTCAGGCAACAAACTTTGAAGAGAATGTCTCACATCCTAACCACCAAACAAGCAGCGCAAGGCTTGCTCGCTTTGGGTGAGTACTTCCATCGTCTTCGTGTTCTTAGTTCCCTCTGGGCCACTCGACCTCGCGAACCTGCCTAG 1167 45.67 MATSPEIEAWVHFTLMIGQQSMSSSSTQLYASRMGIYEPFHQINSWGNAFSSRLDTSISPIIKVDDCVDNKPEFIPFESMDHLESSQEMNKPIDDKVQRRLAQNREAARKSRMRKKVYVQQLETSRLKLAQLEQELERTKQKGVYTSCIVDTSPLGFGGLVNPGIAAFEMEYNHWVEEQQRQVTELRKALQVHITDIELQILVESSLNHYHNLFCMKANAAKADVFYLMSGVWRTSAERFFLWIGGFRPSELLNVLKPYFEPLNEQQRADIHNLQQSSRQAEDALSQGMEKLHQNLSLSIANDPLGSYISQMGDGMERLEALENFVSQPSVCYSFLEQADHLRQQTLKRMSHILTTKQAAQGLLALGEYFHRLRVLSSLWATRPREPA 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 915203 920096 - Tan0013162.7 Tan11g0079 767016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0079 388 SMART brlzneu 92 147 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g0079 388 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 94 138 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g0079 388 PANTHER TRANSCRIPTION FACTOR TGA9 22 387 - -
Tan11g0079 388 SUPERFAMILY Leucine zipper domain 96 136 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g0079 388 Pfam Seed dormancy control 182 257 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Tan11g0079 388 FunFam BZIP family transcription factor 95 144 - -
Tan11g0079 388 Gene3D - 95 144 - -
Tan11g0079 388 ProSiteProfiles DOG1 domain profile. 165 383 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Tan11g0079 388 Coils Coil 264 284 - -
Tan11g0079 388 Coils Coil 115 142 - -
Tan11g0079 388 Coils Coil 176 196 - -
Tan11g0079 388 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 99 114 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g0079 388 Pfam bZIP transcription factor 95 134 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g0076 Tan-Chr11:915203 Tan11g0079 Tan-Chr11:915203 2.70E-210 dispersed
Tan11g0077 Tan-Chr11:915203 Tan11g0079 Tan-Chr11:915203 9.50E-175 dispersed
Tan11g0079 Tan-Chr11:915203 Tan11g1871 Tan-Chr11:24285573 4.00E-71 dispersed
Tan11g0078 Tan-Chr11:915203 Tan11g0079 Tan-Chr11:915203 9.50E-175 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28640 PF14144 DOG1 1.10E-28 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0079 K14431 - csv:101217648 684.485