Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0102 ATGCCCACGAATACCCCCAAAACCTTGCTTCTAGTCTTGACATTCATAGCAACAATCCTAATCCAACCACTGATTTCTTTATGTGATGACGAGGAGGAGAAATATATGAACTGCAACTCATCATTGAAGTGCCCCCAATATCCAAATCTCGGTTATCCTTTCTGGGGTCCGAATCGACCTGATTATTGTGGTCATCCAAGTTTTGAGTTGAGTTGCAAAGATGAAACTCTAGGAATCACAATCAAGTCCATCGCCTATCAAATTCTCGATATCAATACCAGCACACAGACTCTGAAGGTAGCTAGAACGGATTACTGGGACAATATTTGTCCACAGTACTTGAAGAACAACACGTTTGACTCAAATCTCTTTTACTACAGCTCAAACACTCAACCCCTAAAGCTACTCTACGACTGCCCATCCTTGCCCAGTAATCTTCCTGGTCAGTTTATTTGCAACATGAACAGTACACGTTATGTTAATCTCATCCTAACACAAAATACCAATAGTGGTACCTCATACCCGATGAGATGCAACCATAGTGTTGATGTTGCAATCTCTCAATCAGAGATGGAAACTCTACCACGCAATCCAAGTGAGCAAAATCTAACAAAAGCTCTTAAAACTGGATTTGAGTTGCAGTGGAGGATAGACAATAGCGTGTGTTACCGGTGTCAAGAATCAGGCGGCCGGTGTGGTTCAGACCCAAGTTTGGGTGAATTCGCTTGTTATTGCTTAGATGGAGCTTTCAAAACCACTTGTGGATCAACACCATCAGACGAGCCAAAGAAGTCGAAGAAAACAAAACCTAGTGTAATTATTGGTGTTTCAATTGGAGGAGTATGTTTGGTTGCAACAATTTTAGGATGCTGGCTTGTTTACTGTTTGAGAAGAAAGAAGAAACAATATCCAGTTGGATCTATAAGCAAAGAAGTTCCTTCTCCTCTTGTTTCTGATCCTCTTTCAAACAAAGATCATATCCCTCCTGCTCCCCTTTTAAACTCCTTTCAGACTCAAAGCATTCCTTCTTATCCTTCTTCCAAATCTGACCTTCATAAGAGTGGCACCATGTCCAACCATGGGATTATTCAAGTATTCAATTATGCTGAACTCGAAAAGGCTACCGATAATTTTAACCGTTCTCGAGAGCTTGGCGATGGAGGATTTGGCACTGTTTACTATGGGAAGCTTCTTGATGGACGTGAAATTGCTGTGAAGCGTCTATATGAACATAATTGCAAACGAGTGGAACAGTTCATGAATGAAGTGGACATCCTTGCTCATTTAAAACACAAGAACCTTGTCAAACTCTATGGTTGCACCTCCAGATTTAGCCAAGGCCTTCTCCTTGTTTACGAATACATTCCCAACGGAACCGTAGCCGACCATCTCCATGGATCACGGGCGAAGTTCGGTTTGCTCAGTTGGCCTATTCGGTTGCGAATCGCCATCGAAACAGCAAATGCACTTGCGTATCTCCATCACACCGAAATCATCCACCGCGACGTCAAGACCAACAACATTCTCCTTGACAACAACTTCACTGTCAAAGTGGCTGATTTTGGCCTTTCAAGGCTGTTCCCTACCGATGTAACTCATGTGTCCACTGCCCCACAAGGGACACCAGGCTATGTCGATCCTGAGTATTACCAATGTTATCAACTCACGACAAAGAGCGACGTATACAGCTTTGGAGTGGTTTTGATCGAGCTTATATCATCGCTAAGAGCGGTCGACACAGATAGGAAACGACAAGATATCAATTTGAGCAATATGGCAGTGAGTAAAATACAAAGTCAGGCATTGAATGAGTTGATCGACCCGAAGCTCGACTTTGACAAGAATCCTGAAGTTATGAGGGAGATAACATCAGTTGCGGAGTTGGCTTTTCGATGCCTTCAACAGGAAAGGGACATGAGGCCTTCCATGGAAGAAGTGGTGGAAGGATTAAGGGAGATTGAGAATGACAAATCCAGTTTCGGGATGGCTAAAGTTGTCGATATAGGAGTCGTTGGAGACGATACCGAGCTCACGAAGAGAATGCTGCCTTCCTTTTCGCCGAATTCTGTCATAGCTGACAATTGGGTTAGCAGATCTACCACCACAAATTCCTTGTGA 2118 43.25 MPTNTPKTLLLVLTFIATILIQPLISLCDDEEEKYMNCNSSLKCPQYPNLGYPFWGPNRPDYCGHPSFELSCKDETLGITIKSIAYQILDINTSTQTLKVARTDYWDNICPQYLKNNTFDSNLFYYSSNTQPLKLLYDCPSLPSNLPGQFICNMNSTRYVNLILTQNTNSGTSYPMRCNHSVDVAISQSEMETLPRNPSEQNLTKALKTGFELQWRIDNSVCYRCQESGGRCGSDPSLGEFACYCLDGAFKTTCGSTPSDEPKKSKKTKPSVIIGVSIGGVCLVATILGCWLVYCLRRKKKQYPVGSISKEVPSPLVSDPLSNKDHIPPAPLLNSFQTQSIPSYPSSKSDLHKSGTMSNHGIIQVFNYAELEKATDNFNRSRELGDGGFGTVYYGKLLDGREIAVKRLYEHNCKRVEQFMNEVDILAHLKHKNLVKLYGCTSRFSQGLLLVYEYIPNGTVADHLHGSRAKFGLLSWPIRLRIAIETANALAYLHHTEIIHRDVKTNNILLDNNFTVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPEYYQCYQLTTKSDVYSFGVVLIELISSLRAVDTDRKRQDINLSNMAVSKIQSQALNELIDPKLDFDKNPEVMREITSVAELAFRCLQQERDMRPSMEEVVEGLREIENDKSSFGMAKVVDIGVVGDDTELTKRMLPSFSPNSVIADNWVSRSTTTNSL 705
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1099104 1108313 + Tan0020761.1 Tan11g0102 767039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0102 705 ProSitePatterns Protein kinases ATP-binding region signature. 384 406 IPR017441 GO:0005524(InterPro)
Tan11g0102 705 SUPERFAMILY Protein kinase-like (PK-like) 362 648 IPR011009 -
Tan11g0102 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g0102 705 Pfam Wall-associated receptor kinase galacturonan-binding 38 102 IPR025287 GO:0030247(InterPro)
Tan11g0102 705 FunFam Wall-associated receptor kinase-like 20 455 662 - -
Tan11g0102 705 CDD STKc_IRAK 384 653 - -
Tan11g0102 705 Pfam Wall-associated receptor kinase C-terminal 163 248 IPR032872 -
Tan11g0102 705 SMART serkin_6 378 659 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g0102 705 Gene3D Transferase(Phosphotransferase) domain 1 455 670 - -
Tan11g0102 705 ProSiteProfiles Protein kinase domain profile. 378 653 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g0102 705 Gene3D Phosphorylase Kinase; domain 1 350 454 - -
Tan11g0102 705 Pfam Protein tyrosine and serine/threonine kinase 380 649 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g0102 705 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 18 700 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1957 Tan-Chr4:68361743 Tan11g0102 Tan-Chr11:1099104 1.10E-164 dispersed
Tan04g1958 Tan-Chr4:68376493 Tan11g0102 Tan-Chr11:1099104 2.10E-184 dispersed
Tan09g1879 Tan-Chr9:70010256 Tan11g0102 Tan-Chr11:1099104 1.90E-123 dispersed
Tan09g1880 Tan-Chr9:70013523 Tan11g0102 Tan-Chr11:1099104 5.00E-135 dispersed
Tan11g0102 Tan-Chr11:1099104 Tan11g0213 Tan-Chr11:1784671 2.40E-74 dispersed
Tan11g0102 Tan-Chr11:1099104 Tan05g2236 Tan-Chr5:73305477 9.30E-151 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68163 PF00069 Pkinase 7.20E-49 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0102 - - - 0.0