Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0109 ATGGTTCTACTGGAGATTTGCTGTGCTTTCATTGTGAGCAACCATTTCTCATTTGTGTCTTCTCTGAATGAAGAGGGATTAGCTTTACTTTCCTTCAAAAACTCGACTTTCGACCCTGAAGGCTTTCTCCAAAACTGGAACTCCTCTGATGCAACCCCATGTTCGTGGAATGGAATCAATTGCACAGAACAAAGAGTTGTCTCTCTCAGTATTGCAGACAAGAAACTCTCTGGTACTCTCCATCCTGCACTTGGGAAACTTGTGTCCCTCCGCCATTTAAGCCTCCAAAACAACAAGCTTTTTGGAAGCTTCCCTGTTGAGCTCTTCAACCTGGTAGAGCTACGAAGCTTAGACCTCTCACAAAATGTCTTCAATGGTTCTATTCCAGATGGGTTTGGTTCCCACTTGACATCTCTTCAGAACCTCAATCTTTCTTTCAATGCCATCCAGGGTTCGATCCCTGCAGACTTTGGCAACTTGTCCAACTTGCACGACACTCTCGATTTGTCTCACAACGTATTTACCGGTCTGATCCCGCTGAGTCTAAGAAGCCTGCCTGCAAACCTTTATATTGATCTCAGTTACAATAATCTCAGTGGCTCAATACCACCACAAGAAGCTTTCCAGAACCTTGGACCAACGGCTTACATAGGCAATGCCTTTCTATGTGGACTTCCCCTCAATGTTTCATGTCCATCCATAGCTTCGTCAAACCCCGACTTGTGGTTCCATTGCCCATCACATGGGAAAGGTGGAAAATCCTGCTCCATAATCACAGCTTCTGCAAGTATCATAGTTGGTTTCTGTCTGGTTATCCTGGTAGTTTTTTGGTGCAAGAGAGCTTACCCTCCTAAAGGGAGTGAAAATCTAGATGGCTGTAGATTTAGAGAGGCATTGATGTTTAAAACAGAGTTTTCTTGCTTTGCAAAGTTTGAAGTTGAGCCCCTACCAGAAAACATGGAGAAGTATAACTTTGTGCTACTGGATCGGCAAGTCGACTTCGACCTCGAGCAACTTTTGAAAGCCTCGGCTTATCTTCTAGGCAAGAATGGGAATGGGATTGTGTATAAAGTGGTTCTAGAGAAAGGACTAAAGCTAGCAGTTAGAAGATTGGAAGATGGAGCTTATGAAAGGTTTAAAGAGTTCCAAACTGAAGTTGAAGCAATTGGGAAAGTCAAACATCCCAATATTGTAGCTCTTTTAGCTTACTGCTGGTCTGTTGAAGAGAAGCTGCTCATACATGAATACATACCTCAGGGAGACCTGGCCACTGCAATTCATGGGAAAGCAGAAATTTCCTACTTCAGACCACTTTCTTGGGCTGATCGAGTGAAAATCATGAAAGGAATTGCAAAGGGATTGGCATACCTTCACGAATTCAGTCCAAGAAAATACGTCCATGGCGATTTGAAGCCAACCAACATTCTGATCGGAAACAACAAGGAACCCTACATCTCAGATTTCGGACTAGGACGACTTGCAAATGCCGCCGGAGATCTCACGGCCTCATCATCGGAGCAAACCCCCGCCGCAACGCCGCGGCAGCAGAACTCTCCGTTCCGATCAAACTCCATGTGCTCCTCTTTGTCGATAGGGTCCTATTATCAAGCCCCCGAAGCCTTGAAGACGGCAAAGCCATCGCAGAAGTGGGATGTTTACTCATTCGGAGTGATATTACTGGAAATTATCACCGGAAAATCGCCGGTGATTCAAGCGGGCTCGTCGGAGATGGAGCTGGTTCAATGGATTCAACTTGGAATTGAAGAAGGGAAACGGCCATCGTGTATCATAGATCCATCAATGGGCGAGCAAGTGGAGAAGGAAGAAGTTGCGGCGGCCATTGAAATAGCTGTTGCTTGTACTCGGAAGAGCCCTGAGAAGAGACCCTGTATGAGAATTGTCTCTGAATGTTTGGAAAAATTGGCAACTTCATCGTAA 1938 45.25 MVLLEICCAFIVSNHFSFVSSLNEEGLALLSFKNSTFDPEGFLQNWNSSDATPCSWNGINCTEQRVVSLSIADKKLSGTLHPALGKLVSLRHLSLQNNKLFGSFPVELFNLVELRSLDLSQNVFNGSIPDGFGSHLTSLQNLNLSFNAIQGSIPADFGNLSNLHDTLDLSHNVFTGLIPLSLRSLPANLYIDLSYNNLSGSIPPQEAFQNLGPTAYIGNAFLCGLPLNVSCPSIASSNPDLWFHCPSHGKGGKSCSIITASASIIVGFCLVILVVFWCKRAYPPKGSENLDGCRFREALMFKTEFSCFAKFEVEPLPENMEKYNFVLLDRQVDFDLEQLLKASAYLLGKNGNGIVYKVVLEKGLKLAVRRLEDGAYERFKEFQTEVEAIGKVKHPNIVALLAYCWSVEEKLLIHEYIPQGDLATAIHGKAEISYFRPLSWADRVKIMKGIAKGLAYLHEFSPRKYVHGDLKPTNILIGNNKEPYISDFGLGRLANAAGDLTASSSEQTPAATPRQQNSPFRSNSMCSSLSIGSYYQAPEALKTAKPSQKWDVYSFGVILLEIITGKSPVIQAGSSEMELVQWIQLGIEEGKRPSCIIDPSMGEQVEKEEVAAAIEIAVACTRKSPEKRPCMRIVSECLEKLATSS 645
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1163367 1166403 + Tan0017197.1 Tan11g0109 767046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0109 645 MobiDBLite consensus disorder prediction 501 524 - -
Tan11g0109 645 SUPERFAMILY L domain-like 24 227 - -
Tan11g0109 645 SUPERFAMILY Protein kinase-like (PK-like) 346 639 IPR011009 -
Tan11g0109 645 Pfam Protein kinase domain 347 632 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g0109 645 FunFam Leucine-rich repeat receptor-like kinase 25 135 - -
Tan11g0109 645 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 14 130 IPR050647 -
Tan11g0109 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g0109 645 SMART serkin_6 341 638 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g0109 645 FunFam Leucine-rich repeat receptor-like protein kinase 138 233 - -
Tan11g0109 645 Gene3D Phosphorylase Kinase; domain 1 314 416 - -
Tan11g0109 645 Gene3D Transferase(Phosphotransferase) domain 1 417 645 - -
Tan11g0109 645 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Tan11g0109 645 ProSiteProfiles Protein kinase domain profile. 341 641 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g0109 645 SMART LRR_typ_2 185 210 IPR003591 -
Tan11g0109 645 SMART LRR_typ_2 136 159 IPR003591 -
Tan11g0109 645 SMART LRR_typ_2 160 184 IPR003591 -
Tan11g0109 645 SMART LRR_typ_2 87 111 IPR003591 -
Tan11g0109 645 Gene3D Ribonuclease Inhibitor 25 135 IPR032675 -
Tan11g0109 645 Gene3D Ribonuclease Inhibitor 136 233 IPR032675 -
Tan11g0109 645 Pfam Leucine Rich Repeat 114 134 IPR001611 GO:0005515(InterPro)
Tan11g0109 645 Pfam Leucine Rich Repeat 138 160 IPR001611 GO:0005515(InterPro)
Tan11g0109 645 Pfam Leucine Rich Repeat 166 185 IPR001611 GO:0005515(InterPro)
Tan11g0109 645 Pfam Leucine Rich Repeat 89 111 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0814 Tan-Chr4:6926194 Tan11g0109 Tan-Chr11:1163367 1.10E-127 dispersed
Tan08g1706 Tan-Chr8:68754846 Tan11g0109 Tan-Chr11:1163367 4.40E-09 dispersed
Tan11g0109 Tan-Chr11:1163367 Tan05g0548 Tan-Chr5:3907605 5.50E-49 dispersed
Tan11g0109 Tan-Chr11:1163367 Tan11g1832 Tan-Chr11:21409204 1.50E-134 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68164 PF00069 Pkinase 1.70E-35 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0109 - - - 0.0