Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0132 ATGGATAATTACCAAATCTTCTTTCCATCAGCTTCATCCAGCTCTTCTAATAACTCATTGCCATTAATGCCCATGGAGATGGAGTTCACCCACATAACAGATGATCAACAAGAAGAAGAAGAAGATGAAGAAGAAGAAGAAGAAGAAAGTGTGAAAATTAGTGAAGGGAAATTATTAAAAGGGGAGAAGAAGATCAGAAAACCCAGATTTGCGTTTCAAACGAGGAGCCAGGTTGATGTTCTTGACGATGGTTACCGCTGGAGAAAATATGGTCAAAAGGCTGTTAAGAACAACAAATTTCCCAGGAGCTATTACAAGTGTTCACATGGAGGATGCAAAGTGAAGAAGCAAATTCAACGGCTAACAAATGACGAAGGTGTTGTAGTAACAACCTACGAAGGAGTTCATTCCCATCCCATTCAAAATCCCCACGATAACTTTGAACGTATCTTGAACCACATGCAAATTTACCCGCCCAATTCCTTTTAA 489 39.47 MDNYQIFFPSASSSSSNNSLPLMPMEMEFTHITDDQQEEEEDEEEEEEESVKISEGKLLKGEKKIRKPRFAFQTRSQVDVLDDGYRWRKYGQKAVKNNKFPRSYYKCSHGGCKVKKQIQRLTNDEGVVVTTYEGVHSHPIQNPHDNFERILNHMQIYPPNSF 162
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1311187 1312562 + Tan0007931.1 Tan11g0132 767069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0132 162 Gene3D WRKY domain 66 141 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan11g0132 162 Pfam WRKY DNA -binding domain 82 139 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan11g0132 162 MobiDBLite consensus disorder prediction 1 23 - -
Tan11g0132 162 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 33 141 IPR044810 GO:0003700(InterPro)
Tan11g0132 162 SMART WRKY_cls 81 140 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan11g0132 162 SUPERFAMILY WRKY DNA-binding domain 73 140 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan11g0132 162 ProSiteProfiles WRKY domain profile. 76 141 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan11g0132 162 MobiDBLite consensus disorder prediction 1 56 - -
Tan11g0132 162 MobiDBLite consensus disorder prediction 33 50 - -
Tan11g0132 162 FunFam WRKY transcription factor 57 67 141 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan10g0014 Tan-Chr10:432088 Tan11g0132 Tan-Chr11:1311187 8.90E-28 dispersed
Tan10g1087 Tan-Chr10:10214516 Tan11g0132 Tan-Chr11:1311187 2.00E-26 dispersed
Tan10g1324 Tan-Chr10:15803838 Tan11g0132 Tan-Chr11:1311187 1.30E-42 dispersed
Tan11g0132 Tan-Chr11:1311187 Tan11g0459 Tan-Chr11:3714800 2.90E-23 dispersed
Tan11g0132 Tan-Chr11:1311187 Tan03g1377 Tan-Chr3:70290920 2.50E-27 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28644 PF03106 WRKY 3.90E-25 CL0274 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0132 - - - 0.0