Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g0132 | ATGGATAATTACCAAATCTTCTTTCCATCAGCTTCATCCAGCTCTTCTAATAACTCATTGCCATTAATGCCCATGGAGATGGAGTTCACCCACATAACAGATGATCAACAAGAAGAAGAAGAAGATGAAGAAGAAGAAGAAGAAGAAAGTGTGAAAATTAGTGAAGGGAAATTATTAAAAGGGGAGAAGAAGATCAGAAAACCCAGATTTGCGTTTCAAACGAGGAGCCAGGTTGATGTTCTTGACGATGGTTACCGCTGGAGAAAATATGGTCAAAAGGCTGTTAAGAACAACAAATTTCCCAGGAGCTATTACAAGTGTTCACATGGAGGATGCAAAGTGAAGAAGCAAATTCAACGGCTAACAAATGACGAAGGTGTTGTAGTAACAACCTACGAAGGAGTTCATTCCCATCCCATTCAAAATCCCCACGATAACTTTGAACGTATCTTGAACCACATGCAAATTTACCCGCCCAATTCCTTTTAA | 489 | 39.47 | MDNYQIFFPSASSSSSNNSLPLMPMEMEFTHITDDQQEEEEDEEEEEEESVKISEGKLLKGEKKIRKPRFAFQTRSQVDVLDDGYRWRKYGQKAVKNNKFPRSYYKCSHGGCKVKKQIQRLTNDEGVVVTTYEGVHSHPIQNPHDNFERILNHMQIYPPNSF | 162 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1311187 | 1312562 | + | Tan0007931.1 | Tan11g0132 | 767069 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g0132 | 162 | Gene3D | WRKY domain | 66 | 141 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan11g0132 | 162 | Pfam | WRKY DNA -binding domain | 82 | 139 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan11g0132 | 162 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Tan11g0132 | 162 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 33 | 141 | IPR044810 | GO:0003700(InterPro) | |
Tan11g0132 | 162 | SMART | WRKY_cls | 81 | 140 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan11g0132 | 162 | SUPERFAMILY | WRKY DNA-binding domain | 73 | 140 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan11g0132 | 162 | ProSiteProfiles | WRKY domain profile. | 76 | 141 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan11g0132 | 162 | MobiDBLite | consensus disorder prediction | 1 | 56 | - | - | |
Tan11g0132 | 162 | MobiDBLite | consensus disorder prediction | 33 | 50 | - | - | |
Tan11g0132 | 162 | FunFam | WRKY transcription factor 57 | 67 | 141 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan10g0014 | Tan-Chr10:432088 | Tan11g0132 | Tan-Chr11:1311187 | 8.90E-28 | dispersed | |
Tan10g1087 | Tan-Chr10:10214516 | Tan11g0132 | Tan-Chr11:1311187 | 2.00E-26 | dispersed | |
Tan10g1324 | Tan-Chr10:15803838 | Tan11g0132 | Tan-Chr11:1311187 | 1.30E-42 | dispersed | |
Tan11g0132 | Tan-Chr11:1311187 | Tan11g0459 | Tan-Chr11:3714800 | 2.90E-23 | dispersed | |
Tan11g0132 | Tan-Chr11:1311187 | Tan03g1377 | Tan-Chr3:70290920 | 2.50E-27 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28644 | PF03106 | WRKY | 3.90E-25 | CL0274 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g0132 | - | - | - | 0.0 |