Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0143 ATGGCTCGGTGGAATGAGAAACTTGTGGCCTTTTTGAACAATAGATGGTTGGTTTTTGTGGCTGCAATTTGGCTGCAATCTTGCGCTGGAATTGGGTATCTTTTCGGAAGCATATCACCGATTATCAAGACGAATTTGAGTTATAATCAGAGGCAAATTGCGCGCCTTGGTGTTGCCAAGGACCTTGGAGATAGCGTCGGCGTTTTGGCCGGAACCTTGTCGGAGATATTGCCCTTCTGGGGAACTCTGTTGGTCGGTGCTGTCAATAATTTTGTTGGGTATGGTTGGATTTGGCTCATCGTCACTGGTCGAGCTCCTGTTTTGCCTCTCTGGGCTATGTGCGTTCTTGTATTTGTTGGAACCAATGGCGAGACATACTTCAATACGGTTTCTCTGGTTTCTTGCGTACAAAACTTTCCGAAAAGCAGGGGTCCTGTGGTCGGGATTCTGAAAGGCTTTGCTGGTTTAAGTGGTGCAATTTTGACTCAGATATATGCAATCGTGCATTCTCCTGATTCAGCCAATCTTATATTCATGATTGCAGTAGGTCCTGCACTGGTGGCTATTGGTATGATGTTTTTCATCAGACCTGTCGCCGGTCATCGACAAATAAGGCCATCCGATGGCATGAGCTTTACTAGTGTTTATGGTGTCTGCCTCCTTTTGGCTGCATATTTGATGGGAGTCATGCTTGTTGAGGATCTTGTTACCTTGAGCCCCACTGTGATAGCCATTTTTACTGCAGTTATGTTTGTCATCCTTCTTACTCCTTTTTTGATTCCTGTGACATTGACTTTTAGCTCGGAGACGACGACATATCCTGAGCAAGAGTCTCTCCTACAACAGTCACCAAAACAGGAACCTGCTAGATCTGAACCAGATAGTAATGAAGTGATATTTAGTGAGGTTGAAGACGAAAAATCAGAGGGAGAGGACTTACTCCCTGCATCAGAGAGACAAAAACGCATTGCTCAGTTGCAAACAAGACTATTGCAAGCAGCTGCAGAAGGAGCAGTAAGAGTCAAGAGGAGGAAGGGTCCTCGTAGAGGGGAAGACTTCACTTTGGGTCAAGCTTTAATCAAAGCAGACTTTTGGCTTATATTTTTCTCCCTTCTCCTTGGTTCTGGAACTGGATTGACCGTGATCGATAACCTCGGACAGATGAGCCAGTCTTTAGGTTATGATAACACACATATTTTCGTATCGCTGATCAGCATATGGAACTTTCTTGGCCGTGTTGGTGGCGGATACTTCTCTGAGATTGTTGTGAGAGATTATGCTTATCCGAGACCCGTTGCTATGGCGGTTGCACAATTCCTTATGATATTTGGACATATCTTCATCGGTATGGGATGGCCCGGGGCAATGTACATTGGTACTCTCATCACGGGGCTCGGGTATGGGGCTCATTGGGCAATTGTGCCTGCTACTGCCTCTGAATTGTTTGGCTTGAAAAAGTTTGGGGCTTTATACAATTTCCTCACCCTCTCAACTCCTATGGGATCTCTGATATTTTCTGGCTTAATGGCAAGCAGTATATATGATAGTGAAGCAGAGAAGCAAGCTCATAATCATCTCTCACAGCTGCAGAGCTCCTCATCAATTTGGTTCAGCAGACTTTACGCCGACGGACCGCACAAGTGCGTCGGTGCCATATGTTTCTTTCTAACTTGTATGATAATGGCTGGATTCTGTGCTATTGCAGGCATGTTAAGTTTGATTTTGGTGTATCGAACGAAGGGTGTTTACTACAACCTCTATGGAAAATCTCGTGCTTCGACGCTTTCGTAG 1791 45.17 MARWNEKLVAFLNNRWLVFVAAIWLQSCAGIGYLFGSISPIIKTNLSYNQRQIARLGVAKDLGDSVGVLAGTLSEILPFWGTLLVGAVNNFVGYGWIWLIVTGRAPVLPLWAMCVLVFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAIVHSPDSANLIFMIAVGPALVAIGMMFFIRPVAGHRQIRPSDGMSFTSVYGVCLLLAAYLMGVMLVEDLVTLSPTVIAIFTAVMFVILLTPFLIPVTLTFSSETTTYPEQESLLQQSPKQEPARSEPDSNEVIFSEVEDEKSEGEDLLPASERQKRIAQLQTRLLQAAAEGAVRVKRRKGPRRGEDFTLGQALIKADFWLIFFSLLLGSGTGLTVIDNLGQMSQSLGYDNTHIFVSLISIWNFLGRVGGGYFSEIVVRDYAYPRPVAMAVAQFLMIFGHIFIGMGWPGAMYIGTLITGLGYGAHWAIVPATASELFGLKKFGALYNFLTLSTPMGSLIFSGLMASSIYDSEAEKQAHNHLSQLQSSSSIWFSRLYADGPHKCVGAICFFLTCMIMAGFCAIAGMLSLILVYRTKGVYYNLYGKSRASTLS 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1360866 1364374 + Tan0012572.1 Tan11g0143 767080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0143 596 SUPERFAMILY MFS general substrate transporter 15 582 IPR036259 -
Tan11g0143 596 CDD MFS_Mch1p_like 15 568 - -
Tan11g0143 596 MobiDBLite consensus disorder prediction 275 297 - -
Tan11g0143 596 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 586 - GO:0016020(PANTHER)
Tan11g0143 596 Pfam Nodulin-like 15 262 IPR010658 -
Tan11g0143 596 MobiDBLite consensus disorder prediction 275 289 - -
Tan11g0143 596 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2536 Tan-Chr4:84370232 Tan11g0143 Tan-Chr11:1360866 3.60E-70 dispersed
Tan05g1157 Tan-Chr5:10546122 Tan11g0143 Tan-Chr11:1360866 3.70E-91 dispersed
Tan05g1158 Tan-Chr5:10546122 Tan11g0143 Tan-Chr11:1360866 5.60E-66 dispersed
Tan11g0143 Tan-Chr11:1360866 Tan11g0145 Tan-Chr11:1360866 1.30E-235 dispersed
Tan11g0143 Tan-Chr11:1360866 Tan11g0144 Tan-Chr11:1360866 3.80E-270 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0143 - - - 0.0