Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0146 ATGGGATTTTTTTGGAGGGCTTTAATAATGGTTTTGGGTGTGGTTGTAGCCACGACGGTGGGGAAGGGGGAGGGCAGATTAGCAAAGAATTTTTACGCCCGAAGTTGCCCAAACGTGGAGCAAATTGTTACACAATCTGTTACCATCAAGTTTTCTGAGACCTTCGTTACCATCCCTGCAACTTTGCGACTCTTCTTCCATGATTGTTTTGTTGAGGGATGTGATGCTTCGGTGATGATAGCATCACCAAATGGGGATGCAGAGAAGGATGCTGAAGATAACATTTCATTAGCAGGAGATGGATTTGACACTATTATTAGAGCTAAACAAGCTGTTGAAGCTGTTTGTCCTGGTGTTGTCTCTTGTGCCGACATTTTGGCTCTTGCAACTAGGGATGTCGTCGTCTTGGCGGGAGGTCCACAATATAGAGTGGAACTGGGGCGGCGAGATGGGCTCATTTCTCAAGCTTCCCGAGTCGCCGGAAATCTGCCGGAACCATCCTTCGATCTTGACCAACTGACCACCATGTTCGCGGCTCACAACCTCAGCCTCGTCGATATAATCGCCCTCTCCGGCGCCCACACCCTCGGCGTCTCCCACTGCAGCCGTTTCTCCAACCGCCTCTACTCTTTTTCCCCTTCCTCTCCGGTGGACCCTTCGCTCGACCCCACTTACGCCCAGCAGCTAATGCTGGCTTGTCCGCCGAACCCGGATCCCGCCGTAATCGTCAACATGGACCCTGTAACCCCTCAAACCTTCGACAACGTTTACTACCAGAATCTCGTCGCCGGAAAGGGCCTCTTTACCGCCGACCAGATTCTGTTCACGGAGACCAAATCGCAGCCGACGGTCCTCGACTTTGCCAACAATGGGGCCAATTTTAATGAGGCATTTGTCAGGGCCATGACCAGGCTGGGTCGGGTCGGGGTTAAGACCGGCAGGAAGGGTCAAATTCGAAGGGATTGCACTGCCTTTAATTAA 981 51.89 MGFFWRALIMVLGVVVATTVGKGEGRLAKNFYARSCPNVEQIVTQSVTIKFSETFVTIPATLRLFFHDCFVEGCDASVMIASPNGDAEKDAEDNISLAGDGFDTIIRAKQAVEAVCPGVVSCADILALATRDVVVLAGGPQYRVELGRRDGLISQASRVAGNLPEPSFDLDQLTTMFAAHNLSLVDIIALSGAHTLGVSHCSRFSNRLYSFSPSSPVDPSLDPTYAQQLMLACPPNPDPAVIVNMDPVTPQTFDNVYYQNLVAGKGLFTADQILFTETKSQPTVLDFANNGANFNEAFVRAMTRLGRVGVKTGRKGQIRRDCTAFN 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1374627 1378779 - Tan0011307.1 Tan11g0146 767083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0146 326 Pfam Peroxidase 47 290 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0146 326 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0146 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0146 326 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0146 326 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0146 326 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0146 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0146 326 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0146 326 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0146 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0146 326 CDD secretory_peroxidase 27 325 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan11g0146 326 FunFam Peroxidase 30 172 - -
Tan11g0146 326 SUPERFAMILY Heme-dependent peroxidases 27 326 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0146 326 Gene3D - 31 326 - -
Tan11g0146 326 ProSiteProfiles Plant heme peroxidase family profile. 26 326 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0146 326 Gene3D Peroxidase, domain 2 164 305 - -
Tan11g0146 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0146 326 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0146 326 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0146 326 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0146 326 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0146 326 PANTHER - 11 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0146 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Tan11g0146 326 FunFam Peroxidase 164 305 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g0146 Tan-Chr11:1374627 Tan11g0148 Tan-Chr11:1388338 6.00E-121 dispersed
Tan11g0146 Tan-Chr11:1374627 Tan11g0147 Tan-Chr11:1382984 1.00E-152 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0146 K00430 - csv:101213580 511.146