Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0148 ATGGCGGCCATGGCAATGCGAGTGTTGCTGTATTTGGCTCTGGTATGTACACTCATTGGGCTCGGCGAGGGCCAGCTATCGCTAAACTTCTACAACTCGACGTGCCCAAATGTCGAACAAATTGTCCGGCAGGCCGTCAGCCAAAAGATTAGCCAAACGTTCGTTACAGTTCCGGCAACTTTAAGACTGTTCTTCCACGACTGCTTTGTTCAGGGATGTGATGGTTCGGTTATGATAGCGTCGGCGAGTGGCGATGCAGAGAAGGACGCAGAGGACAACCTGTCGTTGGCAGGAGATGGTTTTGATACAGTGATCAAGGCGAAGCAGGCGGTGGAAGCACAATGTCCTGGAAAAGTCTCCTGTGCTGATATATTGGCCATCGCCGCTAGAGATGTCGTTCTTCTGGCGGGAGGGCCAAGTTTCTCTGTTGAACTAGGACGCCGAGACGGTGTAACATCGAAAGCCTCTCTAGTAGCCGGAAACTTACCAGGACCAAGCTTCAACCTGAGCCAACTAAACGCCATGTTCGGCAAAAACAACTTAACCCAAACCGACATGATCGCCTTATCAGGGGCCCACACGGTCGGCTTCTCCCACTGCAGCCGCTTCGCCAACCGCCTTTACTCCTTCTCCCCGACCTCCCCAGTGGACCCTTCTCTCGACCCTAACTACGCCAAACAGCTCAAGAAAGCTTGCCCACAAGATGTTGATCCAAGAATCGCCATCGACATGGACCCTGTAACCCCACAAAAACTCGACAATATTTATTACCAGAACCTGGTCAACCACAAGGGCCTTTTCACGTCGGATCAGGTTCTTTACACTGACCCCTTGTCGCAGCCCACTGTTAGTGCCTTTGCGAACGATCGGAATGGGTTCAATAAAGCCTTTGCCGCGGCTATGGTTCGGCTTGGGAGAGTGGGCAGGAAGGGAATGATTCTTGCAATCAAGTCACGCGCTGGATTTGTTAATGCGTCATTTTCATCTCTAGCTTCTTATGAGAACATTAGGGGCGGTTTTGTCAAGGTAGATAAGAAGACATATAAACCCATTGATATAAGTAGTATTTTTAGGTTTAAATTTCAAAAACTAAAAACTAAAAACAAAATGGGATGCGATGCTTCGGTGATGATTTCATCGCCGAGTGGAGACGCCGAGAAGGATGCTCAAGATAACCTCTCCCTCGCCGGAGATGGCTTCGACACCGTCGTCAAGGCCAAGCAGGCCGTTGAAGCCGCCTGCCCCGGCAAAGTCTCATGTGCCGATATATTGGCTCTCGCCGCCCGAGACGCCGTCGTCCTCGCCGGAGGCCCAAATTTCAACGTGGAATTAGGACGCCGCGACGGCCTCATCTCGAAAGCCTCACGCGTCGACGGAAATTTACCATCCCCAAATTTCGATCTCAACGCACTGACTTCCATCTTCGCGAAAAACGGGCTCTCTCAAACCGACATGATCGCCCTCTCCGGCGGGCACACCATCGGCGCCTCCCACTGCAACCGCTTCTCGGACCGCCTCTTCTCCTCCTCCGGCGTCGATCCCTCGCTGAACCCAGCCTACGCCGAACAGCTGAAACAAGCCTGCCCTCGGAATGTTGACCCAGGCGTCGTGGTGCAGCTAGATCCGACCACTCCGAACACGTTCGACAACGTGTATTACCGGAATTTGATAGACGGGAAAGGACTGTTCAGATCGGATGAGGTTCTGTTCACGAGTTCGGCGTCGAAGGCGACGGTGGTGGGATTTGCGAATAATGGGGGGCAATTCAATGAGGCGTTTGTGGCGGCGATGAGGAAGCTTGGGAGAGTTGGAGTTAAGACGGGGAGGGCTGGAGAGATAAGGAGAGATTGCAGTGCCTTTAACTGA 1866 52.68 MAAMAMRVLLYLALVCTLIGLGEGQLSLNFYNSTCPNVEQIVRQAVSQKISQTFVTVPATLRLFFHDCFVQGCDGSVMIASASGDAEKDAEDNLSLAGDGFDTVIKAKQAVEAQCPGKVSCADILAIAARDVVLLAGGPSFSVELGRRDGVTSKASLVAGNLPGPSFNLSQLNAMFGKNNLTQTDMIALSGAHTVGFSHCSRFANRLYSFSPTSPVDPSLDPNYAKQLKKACPQDVDPRIAIDMDPVTPQKLDNIYYQNLVNHKGLFTSDQVLYTDPLSQPTVSAFANDRNGFNKAFAAAMVRLGRVGRKGMILAIKSRAGFVNASFSSLASYENIRGGFVKVDKKTYKPIDISSIFRFKFQKLKTKNKMGCDASVMISSPSGDAEKDAQDNLSLAGDGFDTVVKAKQAVEAACPGKVSCADILALAARDAVVLAGGPNFNVELGRRDGLISKASRVDGNLPSPNFDLNALTSIFAKNGLSQTDMIALSGGHTIGASHCNRFSDRLFSSSGVDPSLNPAYAEQLKQACPRNVDPGVVVQLDPTTPNTFDNVYYRNLIDGKGLFRSDEVLFTSSASKATVVGFANNGGQFNEAFVAAMRKLGRVGVKTGRAGEIRRDCSAFN 621
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1388338 1401669 - Tan0021563.1 Tan11g0148 767085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0148 621 Gene3D - 370 621 - -
Tan11g0148 621 Pfam Peroxidase 42 289 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 Pfam Peroxidase 355 585 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 Gene3D Peroxidase, domain 2 462 600 - -
Tan11g0148 621 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601(InterPro)
Tan11g0148 621 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 ProSiteProfiles Plant heme peroxidase family profile. 371 621 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 Gene3D Peroxidase, domain 2 163 304 - -
Tan11g0148 621 CDD secretory_peroxidase 371 620 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan11g0148 621 PANTHER - 15 310 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 PRINTS Haem peroxidase superfamily signature 541 556 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 Gene3D - 29 309 - -
Tan11g0148 621 CDD secretory_peroxidase 25 308 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan11g0148 621 ProSiteProfiles Plant heme peroxidase family profile. 25 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 FunFam Peroxidase 29 171 - -
Tan11g0148 621 FunFam Peroxidase 462 600 - -
Tan11g0148 621 SUPERFAMILY Heme-dependent peroxidases 25 310 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 SUPERFAMILY Heme-dependent peroxidases 360 621 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0148 621 ProSitePatterns Peroxidases proximal heme-ligand signature. 484 494 IPR019793 -
Tan11g0148 621 FunFam Peroxidase 163 304 - -
Tan11g0148 621 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g0146 Tan-Chr11:1374627 Tan11g0148 Tan-Chr11:1388338 6.00E-121 dispersed
Tan11g0148 Tan-Chr11:1388338 Tan11g0318 Tan-Chr11:2494991 1.80E-57 dispersed
Tan11g0147 Tan-Chr11:1382984 Tan11g0148 Tan-Chr11:1388338 3.20E-122 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0148 K00430 - csv:101213098 529.635