Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g0201 | ATGAGTTTTGTTTTCCGTGGAACAAGAGTTCCAGACATAGAGAATGGTCTGTCTGGATTTATACCTGAACGGCGTGCAATGCGGGTTCATGCAGCACGTCCTGTTAACTCAAACTCTCTTGCCTTTCTTGTCACAGTCCTTCTGTTATTCATGATATTAAACTCTCACCAGATGTCACCGAACTTTCTGCTCTGGCTTGTGCTTGGTGTCTTTTTGATGGCTACAACATTACGGATGTACGCAACTTGTCAACAACTTCAAGCTCAAGCCCAAGCTAGAGCTATGGCAGCCAGTGGCCTTCTTGGTCACACTGAATTGAGGTTACATATGCCACCATCCATAGCACTTGCAACTAGAGGGCGTTTACAAGGGCTGAGGCTTCAACTTGCTCTGCTTGATCGGGAATTCGATGATTTAGACTACGAAACTTTGAGAGCATTGGATTCCGACAATGCTCCAACAACACCTTCTATGAGTGAGGAACAAATAAATGCTCTTCCTGTTCATAAATACAAGGTTTCTGGTCCTCAAAGTGACCCCGCTGTGAATCAACAGGCTTCATCTTCAGAATCTAATGAGAAGAGACCAGATTCAGTTAATGCAGTTGGCGTTACTAAGACCTTGGAAGATGAACTTACATGCAGTGTTTGCTTGGAGCAAGTAAATGTTGGTGAACTCATACGTAGTTTGCCATGTTTGCATCAGTTCCATGCCAACTGCATAGATCCGTGGTTGCGACAGCAGGGAACGTGCCCTGTTTGTAAATTCAGAGCGGTGTCCGGGTGGTCAGAACAGGGGCAAGGTGAAAACGATGCTTATATGGTTTAA | 828 | 44.93 | MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDPAVNQQASSSESNEKRPDSVNAVGVTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAVSGWSEQGQGENDAYMV | 275 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1690175 | 1692637 | - | Tan0008055.1 | Tan11g0201 | 767138 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g0201 | 275 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 146 | 259 | IPR013083 | - | |
Tan11g0201 | 275 | ProSiteProfiles | Zinc finger RING-type profile. | 214 | 255 | IPR001841 | - | |
Tan11g0201 | 275 | MobiDBLite | consensus disorder prediction | 174 | 199 | - | - | |
Tan11g0201 | 275 | SUPERFAMILY | RING/U-box | 207 | 260 | - | - | |
Tan11g0201 | 275 | CDD | RING-H2_PA-TM-RING | 213 | 255 | - | - | |
Tan11g0201 | 275 | PANTHER | TARGET OF ERK KINASE MPK-1 | 2 | 258 | - | GO:0006511(PANTHER)|GO:0016567(PANTHER)|GO:0061630(PANTHER) | |
Tan11g0201 | 275 | Pfam | Ring finger domain | 213 | 255 | IPR001841 | - | |
Tan11g0201 | 275 | SMART | ring_2 | 214 | 254 | IPR001841 | - | |
Tan11g0201 | 275 | MobiDBLite | consensus disorder prediction | 177 | 198 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan11g0201 | Tan-Chr11:1690175 | Tan11g0967 | Tan-Chr11:7779023 | 5.80E-08 | dispersed | |
Tan11g0201 | Tan-Chr11:1690175 | Tan08g1608 | Tan-Chr8:65449384 | 1.20E-08 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g0201 | K16283 | - | csv:101216306 | 493.812 |