Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0207 ATGGCGAATCGATGGTGGGGTGGAATTGGGAATCTTACGATGAGAGGATTTGATTCTTGTTCTTCCTTCCATCCCAAACAACAACAACAAAAGGATGAACAAGATCAAGAAGAATATCATCTTCATCATCCTCAACTTGGATCTTCTAGCTCTAACGACCCTAATTCCACTCAACAACATGATCCTACTAAAAATGAACATCATCATGGAGCTAAAAACAACAACAGGCGCCCACGAGGGCGGCCACCGGGCTCCAAAAACAAGCCGAAGCCACCGATTGTCATAACCAAAGACACTCCCAACACCCTCCAAAGCCACGTATTCGAAATCACCACCGCCACCGACATAGCCCACTCCATTTCCACCTTCGCTCACCGCCGCCACCGTGGACTCTCCATTCTCAGCGGCACCGGCCTCGTTGCCAACGTCACTCTCCTCCAGCCCTCTGCTCCCGGCGGCGTCATTACCCTCCACGAACGCTTCGAGATCTTGTCTCTCTCCGGCGCTTTCCTTCCCGCGCCGTCCCCCCAGGGGGCTACTGGCTTGACCGTCTATCTCGCTGGAGGCCAAGGCCGGGTCGTCGGCGGCCTGGTCGCCGGTCCCCTTATCGCCGCCGGCCCCGTCATAGTAATTGCAGCTTCGTTTAGCAACGCTATATATGAAAGATTGCCGATTGAGGAGGAGGAGGAGGAGGAGGAAGAGAATAATGCAAATGAGGAAATGGAAATAATGGAAAAGCAAGGGGAAGAAGATGATGGTAATGGAAATAATTCAGTGGGAGGAGCTTCTTTGCCAGTTTATAATTTGATTCCAAATACTCAAATTTGGGCTCCTCTTCCTCTTCCTCCTCCTCCTCCATCATCTTACTAA 870 51.26 MANRWWGGIGNLTMRGFDSCSSFHPKQQQQKDEQDQEEYHLHHPQLGSSSSNDPNSTQQHDPTKNEHHHGAKNNNRRPRGRPPGSKNKPKPPIVITKDTPNTLQSHVFEITTATDIAHSISTFAHRRHRGLSILSGTGLVANVTLLQPSAPGGVITLHERFEILSLSGAFLPAPSPQGATGLTVYLAGGQGRVVGGLVAGPLIAAGPVIVIAASFSNAIYERLPIEEEEEEEEENNANEEMEIMEKQGEEDDGNGNNSVGGASLPVYNLIPNTQIWAPLPLPPPPPSSY 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1733777 1734802 - Tan0008562.1 Tan11g0207 767144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0207 289 PIRSF ESCAROLA 11 277 IPR014476 GO:0003680(InterPro)
Tan11g0207 289 MobiDBLite consensus disorder prediction 43 59 - -
Tan11g0207 289 ProSiteProfiles PPC domain profile profile. 100 236 IPR005175 -
Tan11g0207 289 MobiDBLite consensus disorder prediction 70 84 - -
Tan11g0207 289 SUPERFAMILY AF0104/ALDC/Ptd012-like 101 229 - -
Tan11g0207 289 Gene3D - 104 242 - -
Tan11g0207 289 MobiDBLite consensus disorder prediction 224 239 - -
Tan11g0207 289 MobiDBLite consensus disorder prediction 16 98 - -
Tan11g0207 289 CDD DUF296 106 215 IPR005175 -
Tan11g0207 289 Coils Coil 227 249 - -
Tan11g0207 289 MobiDBLite consensus disorder prediction 224 263 - -
Tan11g0207 289 MobiDBLite consensus disorder prediction 28 42 - -
Tan11g0207 289 FunFam AT-hook motif nuclear-localized protein 103 231 - -
Tan11g0207 289 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 34 261 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Tan11g0207 289 Pfam Plants and Prokaryotes Conserved (PCC) domain 105 216 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan10g0717 Tan-Chr10:5902568 Tan11g0207 Tan-Chr11:1733777 3.30E-54 dispersed
Tan11g0207 Tan-Chr11:1733777 Tan08g0388 Tan-Chr8:3505718 3.80E-58 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0207 - - - 0.0