Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0210 ATGGCCGACATTTGCTTCGTTGGAGATGGCGAACCCTCGCCCCCGTCAAATTCTCGACCGCCAGACTCCACTCGCCGGAAAATGGACTTTCTTCAGCCCAACGCCGCCGCCGGCGATGTCACAGCTTCCTCCTCCTCGACGCCGCCACCAAACGAACGGAAACGCCCTAGACTGCATCACTCCTCCCGGCGGTGCCAAAATGATGAGGAAAGCAGCTTGCAGAGAAATCTTGATGTTGAGACAGTTAAGTATGGGGTGACTTCTGTTTGCGGAAGAAGAAGAGAAATGGAGGACACGGTTTCGGTTCATCCCTCTTTCGCTACTCTCAAAAATCAACCCGAAACTCCTCTTCACTTTTTTGGAGTCTTCGACGGCCATGGTTGCTCTCATGTATCGATGAGCTGTGAGAATCGGATGCATGAAATTGTGAAGGAAGAGATAGAAAGTGAATTAGGAGAAACGGGGGAGTGGAAGAAACTGATGCAACGAAGCTTTGCTCGTATGGATGACGAAATGAAGGAGTATCGGCGGGATATCAAACAGAAAGAAACATCGAATATTAGTTGCAGATGCGAACTTCAAACTCCTCATCAATACGACACCGTCGGATCCACCGCCCTTGTAGCCGTCCTGAGCCCGAACAAATTCATCATCTCAAACTGCGGGGATTCCCGAGCCGTTCTTTGCAGGAAAAGCGCCATCGTACCTCTCTCCTCCGATCATAAGCCGGATCGGCCAGATGAACTATCTCGTATAGAATCAACGGGTGGGCGTGTGGTTTATTGGGATGGAGCGAGAGTGCTTGGAGTTTTAGCAATGTCAAGAGCGATAGGAGATGGTTATCTAAAACCGTACGTGATATCAGAGCCGGAGGTGGTGGAAATGGATTGGACGGCGGAGGATGAGTTTATCGTATTGGCCAGCGATGGGCTGTGGGATGTGGTTTCGAATGAAACTGCCTGTGAGGCAGTCCAGATGTGTATGCGTGCGCAGCGGCCATCGTCACCCTTGGGCTTTGGCTCCGACAAAACTTGCTCCGACGCCTCTATTGTGCTCACAAAGTTGGCCATGGCCAAGCAGAGTTCAGATAACATTAGCGTAGTCGTCATAGATTTGAGAAGAGCATCATCATCATCATCATCATAA 1146 50.35 MADICFVGDGEPSPPSNSRPPDSTRRKMDFLQPNAAAGDVTASSSSTPPPNERKRPRLHHSSRRCQNDEESSLQRNLDVETVKYGVTSVCGRRREMEDTVSVHPSFATLKNQPETPLHFFGVFDGHGCSHVSMSCENRMHEIVKEEIESELGETGEWKKLMQRSFARMDDEMKEYRRDIKQKETSNISCRCELQTPHQYDTVGSTALVAVLSPNKFIISNCGDSRAVLCRKSAIVPLSSDHKPDRPDELSRIESTGGRVVYWDGARVLGVLAMSRAIGDGYLKPYVISEPEVVEMDWTAEDEFIVLASDGLWDVVSNETACEAVQMCMRAQRPSSPLGFGSDKTCSDASIVLTKLAMAKQSSDNISVVVIDLRRASSSSSS 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1765307 1766816 + Tan0001515.1 Tan11g0210 767147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0210 381 ProSiteProfiles PPM-type phosphatase domain profile. 83 372 IPR001932 -
Tan11g0210 381 MobiDBLite consensus disorder prediction 1 74 - -
Tan11g0210 381 ProSitePatterns PPM-type phosphatase domain signature. 119 127 IPR000222 GO:0043169(InterPro)
Tan11g0210 381 PANTHER PROTEIN PHOSPHATASE 68 371 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan11g0210 381 SUPERFAMILY PP2C-like 81 373 IPR036457 -
Tan11g0210 381 Coils Coil 165 185 - -
Tan11g0210 381 MobiDBLite consensus disorder prediction 37 51 - -
Tan11g0210 381 CDD PP2Cc 82 372 IPR001932 -
Tan11g0210 381 FunFam Protein phosphatase 2C 50 110 379 - -
Tan11g0210 381 Pfam Protein phosphatase 2C 83 365 IPR001932 -
Tan11g0210 381 Gene3D - 78 379 IPR036457 -
Tan11g0210 381 SMART PP2C_4 70 370 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2399 Tan-Chr1:29510854 Tan11g0210 Tan-Chr11:1765307 1.10E-98 dispersed
Tan01g2400 Tan-Chr1:29510854 Tan11g0210 Tan-Chr11:1765307 1.20E-65 dispersed
Tan09g1217 Tan-Chr9:64519173 Tan11g0210 Tan-Chr11:1765307 2.50E-60 dispersed
Tan11g0210 Tan-Chr11:1765307 Tan11g1206 Tan-Chr11:9994268 4.70E-32 dispersed
Tan11g0210 Tan-Chr11:1765307 Tan04g1322 Tan-Chr4:13953942 2.40E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0210 K14497 - csv:101220425 463.381