Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g0210 | ATGGCCGACATTTGCTTCGTTGGAGATGGCGAACCCTCGCCCCCGTCAAATTCTCGACCGCCAGACTCCACTCGCCGGAAAATGGACTTTCTTCAGCCCAACGCCGCCGCCGGCGATGTCACAGCTTCCTCCTCCTCGACGCCGCCACCAAACGAACGGAAACGCCCTAGACTGCATCACTCCTCCCGGCGGTGCCAAAATGATGAGGAAAGCAGCTTGCAGAGAAATCTTGATGTTGAGACAGTTAAGTATGGGGTGACTTCTGTTTGCGGAAGAAGAAGAGAAATGGAGGACACGGTTTCGGTTCATCCCTCTTTCGCTACTCTCAAAAATCAACCCGAAACTCCTCTTCACTTTTTTGGAGTCTTCGACGGCCATGGTTGCTCTCATGTATCGATGAGCTGTGAGAATCGGATGCATGAAATTGTGAAGGAAGAGATAGAAAGTGAATTAGGAGAAACGGGGGAGTGGAAGAAACTGATGCAACGAAGCTTTGCTCGTATGGATGACGAAATGAAGGAGTATCGGCGGGATATCAAACAGAAAGAAACATCGAATATTAGTTGCAGATGCGAACTTCAAACTCCTCATCAATACGACACCGTCGGATCCACCGCCCTTGTAGCCGTCCTGAGCCCGAACAAATTCATCATCTCAAACTGCGGGGATTCCCGAGCCGTTCTTTGCAGGAAAAGCGCCATCGTACCTCTCTCCTCCGATCATAAGCCGGATCGGCCAGATGAACTATCTCGTATAGAATCAACGGGTGGGCGTGTGGTTTATTGGGATGGAGCGAGAGTGCTTGGAGTTTTAGCAATGTCAAGAGCGATAGGAGATGGTTATCTAAAACCGTACGTGATATCAGAGCCGGAGGTGGTGGAAATGGATTGGACGGCGGAGGATGAGTTTATCGTATTGGCCAGCGATGGGCTGTGGGATGTGGTTTCGAATGAAACTGCCTGTGAGGCAGTCCAGATGTGTATGCGTGCGCAGCGGCCATCGTCACCCTTGGGCTTTGGCTCCGACAAAACTTGCTCCGACGCCTCTATTGTGCTCACAAAGTTGGCCATGGCCAAGCAGAGTTCAGATAACATTAGCGTAGTCGTCATAGATTTGAGAAGAGCATCATCATCATCATCATCATAA | 1146 | 50.35 | MADICFVGDGEPSPPSNSRPPDSTRRKMDFLQPNAAAGDVTASSSSTPPPNERKRPRLHHSSRRCQNDEESSLQRNLDVETVKYGVTSVCGRRREMEDTVSVHPSFATLKNQPETPLHFFGVFDGHGCSHVSMSCENRMHEIVKEEIESELGETGEWKKLMQRSFARMDDEMKEYRRDIKQKETSNISCRCELQTPHQYDTVGSTALVAVLSPNKFIISNCGDSRAVLCRKSAIVPLSSDHKPDRPDELSRIESTGGRVVYWDGARVLGVLAMSRAIGDGYLKPYVISEPEVVEMDWTAEDEFIVLASDGLWDVVSNETACEAVQMCMRAQRPSSPLGFGSDKTCSDASIVLTKLAMAKQSSDNISVVVIDLRRASSSSSS | 381 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1765307 | 1766816 | + | Tan0001515.1 | Tan11g0210 | 767147 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g0210 | 381 | ProSiteProfiles | PPM-type phosphatase domain profile. | 83 | 372 | IPR001932 | - | |
Tan11g0210 | 381 | MobiDBLite | consensus disorder prediction | 1 | 74 | - | - | |
Tan11g0210 | 381 | ProSitePatterns | PPM-type phosphatase domain signature. | 119 | 127 | IPR000222 | GO:0043169(InterPro) | |
Tan11g0210 | 381 | PANTHER | PROTEIN PHOSPHATASE | 68 | 371 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Tan11g0210 | 381 | SUPERFAMILY | PP2C-like | 81 | 373 | IPR036457 | - | |
Tan11g0210 | 381 | Coils | Coil | 165 | 185 | - | - | |
Tan11g0210 | 381 | MobiDBLite | consensus disorder prediction | 37 | 51 | - | - | |
Tan11g0210 | 381 | CDD | PP2Cc | 82 | 372 | IPR001932 | - | |
Tan11g0210 | 381 | FunFam | Protein phosphatase 2C 50 | 110 | 379 | - | - | |
Tan11g0210 | 381 | Pfam | Protein phosphatase 2C | 83 | 365 | IPR001932 | - | |
Tan11g0210 | 381 | Gene3D | - | 78 | 379 | IPR036457 | - | |
Tan11g0210 | 381 | SMART | PP2C_4 | 70 | 370 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g2399 | Tan-Chr1:29510854 | Tan11g0210 | Tan-Chr11:1765307 | 1.10E-98 | dispersed | |
Tan01g2400 | Tan-Chr1:29510854 | Tan11g0210 | Tan-Chr11:1765307 | 1.20E-65 | dispersed | |
Tan09g1217 | Tan-Chr9:64519173 | Tan11g0210 | Tan-Chr11:1765307 | 2.50E-60 | dispersed | |
Tan11g0210 | Tan-Chr11:1765307 | Tan11g1206 | Tan-Chr11:9994268 | 4.70E-32 | dispersed | |
Tan11g0210 | Tan-Chr11:1765307 | Tan04g1322 | Tan-Chr4:13953942 | 2.40E-28 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g0210 | K14497 | - | csv:101220425 | 463.381 |