Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0243 ATGGCGAAGTTCAGGGATAGGACTGAAGATTTTAAAGATGCTGTGCGGCATTCTGCTTTTTCTTTAGGGTTTAACGAGTCCAAGTTGGCGGGTATTATGGCATCTTTCATCATTCAGAAACCTCGACAAAGGTCACCTTTCATCAAAGCTGCCCTAAAAACGCTAGAGAGCATTGGTGCTCTTGAAGAGTTTATGTTGAAACATCAAAAGGACTATGTAGATATGTATCGCACGACAGATCAAGAGAGAGACGATATTGAACATGAGGTAACTGCCTTCATCAAAGCATGCCAAGAACAAATCGATATCCTAAAAAACAACATTAATGAGGATGAAGCGCACTCAAAGGGCTGGCTTGGTGCTAGGACTGATGATGCTAATGCCGATACTATTGCACACAAACATGGGGTGGTTCTAATTTTGAGTGAGAAACTTCATTCAGTAACAGCACAATTTGATAAGCTAAGAGCCATTCGATTTCAAGATATCATAAACAAAGCAGTACCAAGAAGAAAAGTGAACCAAGTAAATAAACCACGTTCTGCAAATACCCCTGAATATAATAATAATATGGAGCTGAGGGAACCTGATAATTTTGAGCATCAACCTGTCCGAGCCCAACAGCAAATGTTGGATGATGAAACTCGTGCACTTCAGGTTGAGTTGACTAGTCTTCTTGACGCAGTCCAGGAAACAGAAACTAAGATGGTAGAGATGTCTGCTTTAAATCACCTTATGTCTACACACGTTTTGCAGCAAGCACAACAAATTGAACTTCTTTATGAACAGGCTGTTGAAGCTACAAAGAACGTCGAGCTCGGTAATAAAGAACTTGCTCAAGCAATTCAGCGGAATAGCAGCAGCAGAACCTTCCTTCTGCTTTTTCTATTTGTGCTCACCTTTTCAATTCTCTTTCTTGATTGGTATAGTTGA 933 40.41 MAKFRDRTEDFKDAVRHSAFSLGFNESKLAGIMASFIIQKPRQRSPFIKAALKTLESIGALEEFMLKHQKDYVDMYRTTDQERDDIEHEVTAFIKACQEQIDILKNNINEDEAHSKGWLGARTDDANADTIAHKHGVVLILSEKLHSVTAQFDKLRAIRFQDIINKAVPRRKVNQVNKPRSANTPEYNNNMELREPDNFEHQPVRAQQQMLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIELLYEQAVEATKNVELGNKELAQAIQRNSSSRTFLLLFLFVLTFSILFLDWYS 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1956686 1959340 + Tan0012869.1 Tan11g0243 767180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0243 310 Gene3D - 206 307 - -
Tan11g0243 310 SUPERFAMILY t-snare proteins 61 274 IPR010989 GO:0016020(InterPro)|GO:0016192(InterPro)
Tan11g0243 310 Coils Coil 94 114 - -
Tan11g0243 310 FunFam Syntaxin-81 like 213 307 - -
Tan11g0243 310 PANTHER SYNTAXIN-18 1 310 - GO:0005783(PANTHER)|GO:0006890(PANTHER)|GO:0031201(PANTHER)
Tan11g0243 310 Pfam SNARE-complex protein Syntaxin-18 N-terminus 5 86 IPR019529 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0243 K08492 - csv:101207161 551.977