Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0278 ATGACAAATTATTATGATATTGATGACATTCTGGCGGAGGAAGAGCTTGTCTCCGTTGTGTTCCAAAAGGCGGTTAATGGAGTTGGAATCGATCCCAGTTCTGAAACAGATTCTGTTGAATCTGGATCCAAAGTAGAGCTACCCTTCTGGCTTGCGAAAGAGCTGCATCTTAGACAAGTGGCGGTTATGAGCTTACCTGCTTGTTTTAACCAAAGAACACGACTGGAAATTCAGGCGGATGCTGCATTTGTTGATCTACGATCTAGATGTCAATACTTCTATGAATTTGGATGCAAGATTGCACCACTGGTTGGTGATAGAACAATCGGTTCTTGGCTTTTATCCACGTTCAAAAGTAGGTACAAGGAAGTTCTTACCAAGGCTCACACTGCAGTATTTGCTGCAAGTTCTAAATACTTGACAGTTCTATCAAAAGAAGAAACCAAAATGTATGAGGCAGCTCAATCCTCTATGACAGCCTTTAAGAAATGGCGAATGGGTGGGCGTAGATTTCAGAAAGCATCCTTTCTTGGGGGGAAGAGGAAGTCTTCAGAGTAG 558 42.47 MTNYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAKELHLRQVAVMSLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRMGGRRFQKASFLGGKRKSSE 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2186597 2190139 + Tan0018358.2 Tan11g0278 767215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0278 185 PANTHER UNCHARACTERIZED 1 183 IPR010492 GO:0000811(PANTHER)|GO:1902975(PANTHER)
Tan11g0278 185 SUPERFAMILY PriA/YqbF domain 1 66 - -
Tan11g0278 185 Pfam GINS/PriA/YqbF domain 5 55 - -
Tan11g0278 185 CDD GINS_A_psf3 65 167 - -
Tan11g0278 185 SUPERFAMILY GINS helical bundle-like 65 166 IPR036224 -
Tan11g0278 185 Pfam GINS complex protein helical bundle domain 65 165 IPR021151 -
Tan11g0278 185 Gene3D - 1 167 IPR038437 -
Tan11g0278 185 CDD GINS_B_Psf3 4 66 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g0277 Tan-Chr11:2186140 Tan11g0278 Tan-Chr11:2186597 2.20E-88 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0278 K10734 - csv:101203869 343.199