Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0297 ATGAGTCTCGGTGATCAATATTCTGACGCAATTTCTTTACCTGCCAATTCAATTAGGAAGAGGAAGTCACGGAGTAGACGTGATCGATCGACCGTGGCTGAGACTCTTGCTAAGTGGAAAGCTTATAATGAATGTGTTCATTCTTGTAATGATGGAGGCAAGTCAATTCGTAAAGCTCCAGCAAAAGGGTCTAAGAAGGGATGTATGAAAGGTAAAGGAGGACCCTTGAATTCGCATTGCAATTACAGAGGTGTGAGACAGAGGACTTGGGGCAAATGGGTTGCAGAGATTCGTGAACCCAATAGAGGAAGTAGGCTGTGGCTTGGTACCTTCCCTACTGCGATTGAAGCCGCTCTCGCCTACGACGAGGCTGCGAGGACGATGTACGGCCAGAGTGCTCGTTTGAACCTTCCCAACATCACAAACAGAGGGCAGCTAAAGGGGATTCTTTTGGAGGATTATTTGGGGCTACGTAATTCAGATTCTTCAACTGCTACTTCGATGAGTTCTGAATCGACAACAACTGTGTCGAACCAATCTGAGGTCTGTGTGCCTGAGGAGTTCACAACGAGGCCACAACTTGTTCCCTCAAACGTTAAGATTGAAGATGGAGAAGGTGAGTCGAGAATTGGGAATCCAGTTGATCACATTGCGATACCGATGAGCTTAGAGAAGCAAGTGAAGCATGAAGATGTGGATGCTAAATATCGTGAGCAAAGCAATGATCAAGCAGTTCTGTTAGGAATTGAGTTTCCTAGTTTGGATCAGTGGCCGAACTTTCAAACCGATGAAATGTTCGAGTCGAGGACCGGGAATCATTCAGATCACACTGCAAAGCCGATGAGCTTAGAGAAGCAAATGAAGCATGAAGATGTCGATGCTACATATCTTGATCAGAGCAATGATCAAGCAATCTTATTAGGCACAGAGATTCCTGGTTTGGATGAGCTGCAAAACCTTCAGATAGATGAAATGTTTGATGTGGAGGAGCTTCTAGGCCTTATAAATGGTTATTCCATGCATGATCAAAGCTTCTTGCAGGGCAATGTGGACGGTTCTTATAAAATGGCGCCTTCTCAAGTTGGCAACCTTGGGTCTGAGAAACCATCAAGCTTGTCATATCAGTTCCAAAATCCCGACGCGAAGCTGCTCGGAAGCCTCCAACACATGGAGGATGCTCCAGCCGATGTCGATTATGGATTCGATTTCTTGAAACAGGGGAGGGAGGAGGATCTGAATGCTGCAGCGGATGATTGTGTAAGATACCTAAATTATGAGATGGGCGATTTGGGTTTTTGA 1299 45.5 MSLGDQYSDAISLPANSIRKRKSRSRRDRSTVAETLAKWKAYNECVHSCNDGGKSIRKAPAKGSKKGCMKGKGGPLNSHCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAIEAALAYDEAARTMYGQSARLNLPNITNRGQLKGILLEDYLGLRNSDSSTATSMSSESTTTVSNQSEVCVPEEFTTRPQLVPSNVKIEDGEGESRIGNPVDHIAIPMSLEKQVKHEDVDAKYREQSNDQAVLLGIEFPSLDQWPNFQTDEMFESRTGNHSDHTAKPMSLEKQMKHEDVDATYLDQSNDQAILLGTEIPGLDELQNLQIDEMFDVEELLGLINGYSMHDQSFLQGNVDGSYKMAPSQVGNLGSEKPSSLSYQFQNPDAKLLGSLQHMEDAPADVDYGFDFLKQGREEDLNAAADDCVRYLNYEMGDLGF 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2356615 2358521 - Tan0014325.1 Tan11g0297 767234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0297 432 FunFam Ethylene-responsive transcription factor 2 80 139 - -
Tan11g0297 432 MobiDBLite consensus disorder prediction 161 183 - -
Tan11g0297 432 Pfam AP2 domain 81 130 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g0297 432 PRINTS Ethylene responsive element binding protein signature 104 120 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g0297 432 PRINTS Ethylene responsive element binding protein signature 82 93 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g0297 432 CDD AP2 80 139 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g0297 432 Gene3D AP2/ERF domain 81 139 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g0297 432 SMART rav1_2 81 144 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan11g0297 432 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 17 365 - GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006950(PANTHER)|GO:0045893(PANTHER)
Tan11g0297 432 SUPERFAMILY DNA-binding domain 81 138 IPR016177 GO:0003677(InterPro)
Tan11g0297 432 ProSiteProfiles AP2/ERF domain profile. 81 138 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g0291 Tan-Chr11:2285809 Tan11g0297 Tan-Chr11:2356615 1.80E-19 dispersed
Tan11g0297 Tan-Chr11:2356615 Tan02g0906 Tan-Chr2:10300919 5.70E-18 dispersed
Tan11g0296 Tan-Chr11:2356250 Tan11g0297 Tan-Chr11:2356615 4.40E-241 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28653 PF00847 AP2 1.10E-14 CL0081 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0297 K09286 - csv:101215431 572.007