Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0319 ATGTCAAGAGAAAGGGAATTGGAGGTTGTTGATGAGATAGGGAAGAAGATCAAGAGGGAAGTTGAAGGTTTAATGGGAATTAGAAGAAACATTTTGAGTCCAGTACATGGGACATTGAATACAATAACACCATGTGCAGCTTGTAAGCTTCTTAGAAGAAGGTGTGCCCAAGAATGCCCATTTTCTCCTTATTTCTCTCCACATGAACCCCACAAGTTTGCTTCTGTCCACAAAGTTTTTGGTGCCAGCAACGTTGCTAAGATGCTCATGGAGGTACCGGAGAGTCAAAGAGCAGACGCCGCAAACAGTTTAGTTTATGAAGCCAATCTGAGGCTAAGAGATCCAGTTTATGGTTGTATGGGCGCCATTTCAACTCTTCAACACCAAGTTCAAACTTTACAAGTTGAACTCGCTGCTATTAGAACTGAGATTTTGAAGTACAAATATAGAGAAGCCATAATAATCCCTTCTCCTCCTCCTCCTCCTTCTTCTTCTTCACACATCACTTTGATTTCCTCCACCGCAACCCCGCCTGCAGCCCCGCCGACTCCACCACATTCTCAGCCGCCTCCGCTCTCTCTTCCGCCGCCTCTTCCTCCGTCATCCTCCTCCATCTACTCCCCGCCCATCACTACTGCTACTGCCCCTGAATTTAACCCCATCTCAACCCAACATATTTCCTACTTCGGTTGA 693 46.18 MSRERELEVVDEIGKKIKREVEGLMGIRRNILSPVHGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISTLQHQVQTLQVELAAIRTEILKYKYREAIIIPSPPPPPSSSSHITLISSTATPPAAPPTPPHSQPPPLSLPPPLPPSSSSIYSPPITTATAPEFNPISTQHISYFG 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2505729 2508060 - Tan0005073.1 Tan11g0319 767256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0319 230 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 42 163 - -
Tan11g0319 230 ProSiteProfiles LOB domain profile. 43 144 IPR004883 -
Tan11g0319 230 MobiDBLite consensus disorder prediction 158 217 - -
Tan11g0319 230 MobiDBLite consensus disorder prediction 177 204 - -
Tan11g0319 230 Pfam Lateral organ boundaries (LOB) domain 44 140 IPR004883 -
Tan11g0319 230 Coils Coil 123 143 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0608 Tan-Chr5:4443176 Tan11g0319 Tan-Chr11:2505729 7.90E-40 dispersed
Tan05g2776 Tan-Chr5:79905354 Tan11g0319 Tan-Chr11:2505729 3.30E-38 dispersed
Tan07g1392 Tan-Chr7:64748048 Tan11g0319 Tan-Chr11:2505729 2.50E-34 dispersed
Tan11g0319 Tan-Chr11:2505729 Tan11g0653 Tan-Chr11:5740323 3.30E-33 dispersed
Tan11g0319 Tan-Chr11:2505729 Tan04g1404 Tan-Chr4:15936011 1.20E-62 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28655 PF03195 LOB 1.50E-40 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0319 - - - 0.0