Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0336 ATGCTGCCATTTTTGAAGATGAAAGGGCTACTGGGTTTGTTCGTCTTGCTCGTTGTAGCTCCAGTGTTTGTGAGATCTCTGAACCCACCTCTGAACGACGACGTTTTGGGCCTGATTGTGTTCAAGGCCGACATTGAAGATCCTAAAGGAAAACTCGCCTCGTGGAATGAAGATGACGATAGCCCCTGTAATTGGATTGGTGTAAAATGCAACCCCAGATCCAATAGAGTCGTTGAGCTCGCTCTTGATGGCTTTTCTCTCAATGGCAGGCTCGGCCGCGGCCTTCTTCAGCTGCAGTTTCTTCGTAAACTTTCACTTTCGAACAACAATCTCACTGGGAATTTGAGTCCCAATAATGCTCGGTTTGAAAATCTTCGAGTGGTCGATTTAAGCGGCAACAGTTTTTCTGGGATGATTCCGGACGATTTCTTCCGGCAATGTGGGTCGTTGAGAGTGATCTCTTTGGCTAAGAACAAATTTTCTGGGAGAATCCCTGAAAGTTTGGGCTCTTGTACTAGTCTTGCTGCTGTCAATTTATCTTCTAATCAGTTTTCAGGTTCATTGCCTTCTGGGATTTGGTCCTTGACTGGGCTTCGATCTTTGGATTTGTCTGATAATGTTTTGGAAGGTGAAATTCCGCAGGAGGTGAAGGGTATGAATAATTTGAGAGCTGTTAATTTGGGGAAGAATCGGTTTTCTGGACAGATCCCAGATGGGATTGGGAGTTGTTTGCTCTTGAGGTCTGTTGATCTCAGTGAGAATTCGTTCTCCGGCGTCATTCCGGCAACAATGAAGAAGCTTAGTTTATGCAGTACTCTTAATTTAAGAAGAAACTTATTTGGAGGAAAGGTTCCTGAATGGATTGGTGAAATGGAAGGCCTTCAAATCTTGGATCTTTCAGAGAATAGATTTACTGGTCTGGTTCCAAGTTCATTTGAGAAACTTCAAAATCTGAAGGTTTTAAATCTTTCTGAAAATGGCTTAACTGGGAGTTTGGCAGAGTCCATTGTTCCGTCACAGAACCTTTCAGCCGTGGATCTTGGTCACGGTTCTCTAACTGGTGTTCTTCCGGCGTGGATTCTGAAGCTGGGTTCTCAAAATGTATTGCCTTCTGATGTCAAAAGAAGCTCTCTTTCTACAACGATGGGGAAAGCACTTGTCAATCTTCAAGTTCTAGATTTGTCTCGCAATGCATTTTCAGGTGAAATTTCACCTGATATTGGGGCATTAAGTAATTTGCAGGTGTTGAACCTGCGCAAGAACTCATTTGTTGGGGCTATTCCTGAGAGTATTGGAGGGTTGAAGGCCTTGGTTTTTCTTGACTTGAGTGAGAACCAGTTGAATGGAAGCATTCCCGAGGCAATCGGCGGAGATGCATTGTTGAAAGAATTGAAACTGGAGAAAAACTTGCTGGAGGGTGAAGTTCCAAATTCAGTGGGGAACTGTTCTTCACTTGTAACTCTGGACATATCAGAAAACAGATTAATTGGCTCCATACCAGCAGCATTGTCTCAACTGACTAATCTTCAAATTGTGGACTTGTCAACAAACAATCTCAGTGGTGCACTGCCTAAACAGTTGGCCAATCTTCCCAACCTTCTTTTGTTTAACATTTCTCACAACAATCTGCAAGGTGAACTGCCTGCAGGTGGCTTTTTCAACACAATCTCCCCTTCCTCTGTAGCTGGAAATCCTTCTCTTTGTGGTTCTATTGTCAAGAAGTCTTGCCCTGGTGTCCTTCCAAAACCTATTGTTCTCAATCCCAACTCATCCTCTGACTCTGGTTCTCCTTCATTACCTTCAACTCTTGGTCACAAAAAAATCATCCTCAGCATCTCTGCCCTCATTGCCATTGGTGCAGCTGCTGTTATCCTCGTCGGTGTAGTTGCAATCACCGTCCTTAACTTCCATGTTCGGTCATCTGCCAATCATCCTGAAGCAGCCATCACGTTTTCTGGAGGGGATGACTTCAGCCACTCCCCAACTACAGATGCCAATTCTGGCAAGCTTGTCATGTTCTCGGGGGAGCCCGACTTCAGTACTGGTGCACACTCTCTCCTTAACAAGGATTGTGAGCTTGGCCGTGGCGGATTTGGAGCAGTTTACCAGACTGTTCTTCGTGATGGGCATCCGGTTGCCATAAAAAAACTCACTGTTTCAAGTCTTGTCAAATCTCAAGAAGACTTTGAAAGGGAGGTTAAGAAGTTAGGGAAGATCAGGCACCAAAATCTTGTAGCTCTAGAAGGTTATTACTGGACTCCATCTCTGCAGCTCCTCATATATGAATTTGTTTCTGGAGGGAGTTTGTATAAACAGCTTCATGAAGGATTGGGAGGAAACATCCTCTCATGGAACGAAAGGTTCAATATCATCCTCGGAACAGCGAAAAGCTTGGCACATTTGCACCAAATGAACATCATTCACTACAATATAAAATCAAGCAATGTCCTTATTGATAGTTCGGGTGATCCTAAAGTCGGAGATTTTGGCCTAGCTAGATTGTTACCAATGCTCGACCGATATGTGTTGAGCAGCAAGATACAGAGTGCACTCGGCTATATGGCACCCGAATTTGCCTGCAAAACAGTTAAGATAACAGAGAAATGTGATGTGTATGGATTTGGAGTTCTAGTTCTTGAGGTGGTAACTGGGAAGAGACCTGTAGAGTACATGGAAGACGACGTCGTGGTACTCTGCGACATGGTTCGACGGGCCCTGGAAGAAGGTCGGGTGGAGGAATGCATTGATGGGAAGCTTCAGAGGAATTTTCCATCAGAGGAGGCCATACCAGTAGTGAAACTAGGCTTGATATGCACCTCTCAGGTGCCATCAAACCGACCTGATATGGCAGAGGTTGTTAATATATTAGAACTTATCAGATGTCCATCAGAAGGCCAAGAAGAATTGGGATAA 2913 44.35 MLPFLKMKGLLGLFVLLVVAPVFVRSLNPPLNDDVLGLIVFKADIEDPKGKLASWNEDDDSPCNWIGVKCNPRSNRVVELALDGFSLNGRLGRGLLQLQFLRKLSLSNNNLTGNLSPNNARFENLRVVDLSGNSFSGMIPDDFFRQCGSLRVISLAKNKFSGRIPESLGSCTSLAAVNLSSNQFSGSLPSGIWSLTGLRSLDLSDNVLEGEIPQEVKGMNNLRAVNLGKNRFSGQIPDGIGSCLLLRSVDLSENSFSGVIPATMKKLSLCSTLNLRRNLFGGKVPEWIGEMEGLQILDLSENRFTGLVPSSFEKLQNLKVLNLSENGLTGSLAESIVPSQNLSAVDLGHGSLTGVLPAWILKLGSQNVLPSDVKRSSLSTTMGKALVNLQVLDLSRNAFSGEISPDIGALSNLQVLNLRKNSFVGAIPESIGGLKALVFLDLSENQLNGSIPEAIGGDALLKELKLEKNLLEGEVPNSVGNCSSLVTLDISENRLIGSIPAALSQLTNLQIVDLSTNNLSGALPKQLANLPNLLLFNISHNNLQGELPAGGFFNTISPSSVAGNPSLCGSIVKKSCPGVLPKPIVLNPNSSSDSGSPSLPSTLGHKKIILSISALIAIGAAAVILVGVVAITVLNFHVRSSANHPEAAITFSGGDDFSHSPTTDANSGKLVMFSGEPDFSTGAHSLLNKDCELGRGGFGAVYQTVLRDGHPVAIKKLTVSSLVKSQEDFEREVKKLGKIRHQNLVALEGYYWTPSLQLLIYEFVSGGSLYKQLHEGLGGNILSWNERFNIILGTAKSLAHLHQMNIIHYNIKSSNVLIDSSGDPKVGDFGLARLLPMLDRYVLSSKIQSALGYMAPEFACKTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRRALEEGRVEECIDGKLQRNFPSEEAIPVVKLGLICTSQVPSNRPDMAEVVNILELIRCPSEGQEELG 970
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2634873 2638640 - Tan0005470.1 Tan11g0336 767273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0336 970 Pfam Protein tyrosine and serine/threonine kinase 689 955 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g0336 970 SUPERFAMILY Protein kinase-like (PK-like) 689 960 IPR011009 -
Tan11g0336 970 SMART LRR_typ_2 291 314 IPR003591 -
Tan11g0336 970 SMART LRR_typ_2 386 410 IPR003591 -
Tan11g0336 970 SMART LRR_typ_2 434 458 IPR003591 -
Tan11g0336 970 SMART LRR_typ_2 530 554 IPR003591 -
Tan11g0336 970 SMART LRR_typ_2 506 529 IPR003591 -
Tan11g0336 970 SMART LRR_typ_2 195 218 IPR003591 -
Tan11g0336 970 SMART LRR_typ_2 315 338 IPR003591 -
Tan11g0336 970 SMART LRR_typ_2 122 146 IPR003591 -
Tan11g0336 970 SMART LRR_typ_2 219 243 IPR003591 -
Tan11g0336 970 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 681 763 - -
Tan11g0336 970 ProSitePatterns Protein kinases ATP-binding region signature. 693 716 IPR017441 GO:0005524(InterPro)
Tan11g0336 970 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Tan11g0336 970 SUPERFAMILY L domain-like 54 280 - -
Tan11g0336 970 Pfam Leucine Rich Repeat 246 267 IPR001611 GO:0005515(InterPro)
Tan11g0336 970 Pfam Leucine Rich Repeat 508 530 IPR001611 GO:0005515(InterPro)
Tan11g0336 970 Pfam Leucine Rich Repeat 101 117 IPR001611 GO:0005515(InterPro)
Tan11g0336 970 Pfam Leucine Rich Repeat 198 218 IPR001611 GO:0005515(InterPro)
Tan11g0336 970 Pfam Leucine Rich Repeat 484 506 IPR001611 GO:0005515(InterPro)
Tan11g0336 970 Pfam Leucine Rich Repeat 221 243 IPR001611 GO:0005515(InterPro)
Tan11g0336 970 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 311 580 - -
Tan11g0336 970 PANTHER OS05G0588300 PROTEIN 381 473 IPR050994 -
Tan11g0336 970 Gene3D Ribonuclease Inhibitor 293 579 IPR032675 -
Tan11g0336 970 Gene3D Phosphorylase Kinase; domain 1 680 763 - -
Tan11g0336 970 SUPERFAMILY L domain-like 236 560 - -
Tan11g0336 970 PRINTS Leucine-rich repeat signature 506 519 - -
Tan11g0336 970 PRINTS Leucine-rich repeat signature 437 450 - -
Tan11g0336 970 Pfam Leucine rich repeat 388 447 IPR001611 GO:0005515(InterPro)
Tan11g0336 970 Pfam Leucine rich repeat 293 349 IPR001611 GO:0005515(InterPro)
Tan11g0336 970 Pfam Leucine rich repeat 124 184 IPR001611 GO:0005515(InterPro)
Tan11g0336 970 Gene3D Transferase(Phosphotransferase) domain 1 764 968 - -
Tan11g0336 970 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 32 310 - -
Tan11g0336 970 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 764 965 - -
Tan11g0336 970 CDD STKc_IRAK 693 959 - -
Tan11g0336 970 Gene3D Ribonuclease Inhibitor 189 287 IPR032675 -
Tan11g0336 970 Gene3D Ribonuclease Inhibitor 32 188 IPR032675 -
Tan11g0336 970 ProSiteProfiles Protein kinase domain profile. 687 959 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g0336 Tan-Chr11:2634873 Tan10g0239 Tan-Chr10:2138535 8.80E-51 dispersed
Tan01g1965 Tan-Chr1:21772237 Tan11g0336 Tan-Chr11:2634873 8.20E-80 transposed
Tan08g2242 Tan-Chr8:73945426 Tan11g0336 Tan-Chr11:2634873 1.20E-182 transposed
Tan10g1269 Tan-Chr10:14433395 Tan11g0336 Tan-Chr11:2634873 3.20E-27 transposed
Tan11g0336 Tan-Chr11:2634873 Tan04g1429 Tan-Chr4:16740121 2.50E-191 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68173 PF00069 Pkinase 3.00E-41 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0336 - - - 0.0