Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0395 ATGGGAATGAAGAGAACTGCTTTCTGTCTTGTGGCTTCTTTATTGTTTTGGGCTTCTGCAATAAATGGCTTGCTATCTCCTAAAGGTGTAAACTATGAAGTTCAAGCTTTGATGGGTATAAAAGCTTCCCTTCAAGATCCCCATGGTGTGCTTGAGAATTGGGATGGGGATTCTGTTGACCCATGTAGCTGGACTATGGTTACTTGCTCTCCTGAGAGCCTTGTCATTGGCCTAGGGACTCCAAGCCAGAACCTGTCTGGGACTCTTTCTTTAAGCATTGGGAATTTGACAAACCTTCAAATTGTGCTGTTGCAGAACAACAATATTACAGGTCCAATTCCCCCAGAGCTCGGGAGGCTCTCAAAGCTTCAAACACTTGATCTATCAAACAACTTCTTCACTGGGGAAATTCCTTCTTCTTTAGGTCATTTGAGAAGCCTACAGTACTTGAGGCTTAACAATAACAGTCTTTCTGGGGCAATTCCAATGTCTTTAGCCAACATGACCCAACTTGCCTTTCTTGATGTGTCTTATAATAATATCAGTGGCCCGCTGCCAAGATTTCCTAGCAAAACATTCAACATTGTTGGAAATCCTCTGATTTGTGCAACAGGGTCAGAGGCCGGTTGCCACGGGACAACTCTAATGCCCATGTCCATGAATTTGAACACTACACAGGCTGGTTTACCTCCTGTGAGAATGAAGAGTCACAAAATGGCCCTTACATTTGGCTTGAGCCTAGCTTGCCTATGTCTGATTGTTCTTGTATTTGGACTGTTTATATGGTGGAGAAGACGAAGCAATCAACCCACATTCTTCGATGTAAAAGATCGACAACACGAGGAAATTTCGCTTGGAAATCTGAGAAGGTTCCAATTTAGAGAACTTCAGATAGCAACAAACAACTTTAGCAGCAAGAACATACTAGGAAAGGGAGGTTTTGGAAATGTTTACAAAGGAATTCTTTCGGATGGAACGGTTGTAGCTGTTAAAAGACTCAAAGATGGCAATGCAAGTAGAGGCGAGATCCAGTTTCAGACTGAAGTTGAGATGATCAGCCTAGCCGTTCACCGTCATCTCCTCAGACTATATGGCTTTTGCAACACACCTACCGAAAGGCTTCTTGTTTACCCGTATATGTCTAATGGAAGTGTCGCCTCCCGTCTCAAAGGAAAACCGGTATTAGATTGGGGAACAAGGAAGAGAATAGCTATAGGAGCTGCAAGGGGATTGTTATACCTCCATGAACAGTGTGACCCCAAAATAATACATAGAGACGTTAAGGCTGCAAACATATTGCTCGACGACTACTGCGAGGCTGTCGTTGGAGATTTCGGGTTGGCAAAGCTTCTAGACCATCAAGATTCACATGTCACAACTGCTGTGAGAGGCACTGTGGGACATATAGCTCCCGAGTATCTCTCCACTGGACAGTCATCCGAGAAAACAGACGTTTTCGGATTCGGAATCCTACTTCTTGAACTGATCACAGGACAGAGAGCTCTTGAGTTTGGCAAAGCAGCTAATCAGAAGGGAGGCATTCTTGACTGGGTGAAGAAGATTCATCTAGAGAAGAAACTGGAAGTGCTAGTGGACAAGGATCTGAAAGCAAACTATGACAGAGTTGAACTAGAGGAAATGGTTCAAGTGGCTCTATTGTGCACACAATATCTACCAGGACACAGACCAAAGATGTCAGAAGTAGTCAGAATGCTTGAAGGAGAAGGGCTTGCAGTGAGATGGGAAGCTTCTCAGAGAGTTGATTCATCAAAGTGCAAACCCCATGATTTTTCTTCATCAGACAGATACTCTGATCTCACAGATGATTCATCATTGTTGGTCCAAGCCATGGAGCTCTCTGGTCCAAGGTGA 1872 43.96 MGMKRTAFCLVASLLFWASAINGLLSPKGVNYEVQALMGIKASLQDPHGVLENWDGDSVDPCSWTMVTCSPESLVIGLGTPSQNLSGTLSLSIGNLTNLQIVLLQNNNITGPIPPELGRLSKLQTLDLSNNFFTGEIPSSLGHLRSLQYLRLNNNSLSGAIPMSLANMTQLAFLDVSYNNISGPLPRFPSKTFNIVGNPLICATGSEAGCHGTTLMPMSMNLNTTQAGLPPVRMKSHKMALTFGLSLACLCLIVLVFGLFIWWRRRSNQPTFFDVKDRQHEEISLGNLRRFQFRELQIATNNFSSKNILGKGGFGNVYKGILSDGTVVAVKRLKDGNASRGEIQFQTEVEMISLAVHRHLLRLYGFCNTPTERLLVYPYMSNGSVASRLKGKPVLDWGTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGGILDWVKKIHLEKKLEVLVDKDLKANYDRVELEEMVQVALLCTQYLPGHRPKMSEVVRMLEGEGLAVRWEASQRVDSSKCKPHDFSSSDRYSDLTDDSSLLVQAMELSGPR 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3166273 3170519 + Tan0000270.1 Tan11g0395 767332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0395 623 SUPERFAMILY L domain-like 32 304 - -
Tan11g0395 623 Gene3D Transferase(Phosphotransferase) domain 1 380 592 - -
Tan11g0395 623 FunFam Putative LRR receptor-like serine/threonine-protein kinase 30 212 - -
Tan11g0395 623 FunFam Somatic embryogenesis receptor kinase 1 272 379 - -
Tan11g0395 623 Pfam Leucine Rich Repeat 98 120 IPR001611 GO:0005515(InterPro)
Tan11g0395 623 Gene3D Phosphorylase Kinase; domain 1 272 379 - -
Tan11g0395 623 SMART serkin_6 303 572 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g0395 623 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 9 623 - -
Tan11g0395 623 Gene3D Ribonuclease Inhibitor 30 212 IPR032675 -
Tan11g0395 623 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Tan11g0395 623 SUPERFAMILY Protein kinase-like (PK-like) 280 573 IPR011009 -
Tan11g0395 623 Pfam Leucine rich repeat 122 181 IPR001611 GO:0005515(InterPro)
Tan11g0395 623 ProSiteProfiles Protein kinase domain profile. 303 558 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g0395 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g0395 623 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524(InterPro)
Tan11g0395 623 FunFam Somatic embryogenesis receptor-like kinase 1 380 592 - -
Tan11g0395 623 Pfam Protein tyrosine and serine/threonine kinase 306 572 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2092 Tan-Chr2:90498898 Tan11g0395 Tan-Chr11:3166273 3.40E-153 dispersed
Tan03g2587 Tan-Chr3:79006919 Tan11g0395 Tan-Chr11:3166273 8.30E-123 dispersed
Tan03g2588 Tan-Chr3:79006919 Tan11g0395 Tan-Chr11:3166273 2.90E-148 dispersed
Tan09g1605 Tan-Chr9:67795895 Tan11g0395 Tan-Chr11:3166273 1.10E-156 dispersed
Tan09g1606 Tan-Chr9:67795895 Tan11g0395 Tan-Chr11:3166273 1.10E-156 dispersed
Tan11g0395 Tan-Chr11:3166273 Tan11g1616 Tan-Chr11:15754951 1.90E-224 dispersed
Tan11g0395 Tan-Chr11:3166273 Tan09g1285 Tan-Chr9:65032981 1.10E-75 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68175 PF00069 Pkinase 5.10E-44 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0395 - - - 0.0