Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0413 ATGGGTGCTGTCTGCTGCTGTTTGAGTGTGGAGGATTTTGAAGACTATGTCAATCCTAATAGTTCAGTGTATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAATTTCTTAAATGCTTACACGTTGATTTTTCGAAGAGGAGAAGTGCATTCTGTCTCTTCATCAATTCAAGGGGCAACATCTATGAATTCTTCAGCATCAATAGATAACTCTTTATCTGAAATATACCGCTCACCTCCAAGGCCGTTGCCATATGATGCTGACCCCAGATACATCCGCTTGCAGCGGGATGGATTGATTTCTAGGCGAGAGAAGGGGTCAAGCCATTTACATGAGGAATCAGAACCTCTAAGAAGTGAAGCAGATACAGATTCAGATTCTATGGGCTCGGCAGGAAAATGGAATGGATCTGCTTGTCTCGAGGAATCTAAAGAAAATCTTGGCAAGTCATCTCTAAAGTTCCCATCAACTAAATCTACCACTGGAGTTGGGTATGCTTATACATCCTCTGAAGACGAGGATGTCTGTCCAACATGTCTTGAAGGTTGA 552 42.39 MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGATSMNSSASIDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRSEADTDSDSMGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTCLEG 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3323558 3328875 + Tan0019447.3 Tan11g0413 767350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0413 183 MobiDBLite consensus disorder prediction 103 123 - -
Tan11g0413 183 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 182 - GO:0004842(PANTHER)
Tan11g0413 183 MobiDBLite consensus disorder prediction 103 183 - -
Tan11g0413 183 MobiDBLite consensus disorder prediction 150 168 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g0413 Tan-Chr11:3323558 Tan11g0415 Tan-Chr11:3323929 6.00E-102 dispersed
Tan11g0412 Tan-Chr11:3323558 Tan11g0413 Tan-Chr11:3323558 4.80E-101 tandem
Tan11g0413 Tan-Chr11:3323558 Tan11g0414 Tan-Chr11:3323929 3.00E-101 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0413 - - - 0.0