Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan11g0415 | ATGGGTGCTGTCTGCTGCTGTTTGAGTGTGGAGGATTTTGAAGACTATGTCAATCCTAATAGTTCAGTGTATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAATTTCTTAAATGCTTACACGTTGATTTTTCGAAGAGGAGAAGTGCATTCTGTCTCTTCATCAATTCAAGGGGCAACATCTATGAATTCTTCAGCATCAATAGATAACTCTTTATCTGAAATATACCGCTCACCTCCAAGGCCGTTGCCATATGATGCTGACCCCAGATACATCCGCTTGCAGCGGGATGGATTGATTTCTAGGCGAGAGAAGGGGTCAAGCCATTTACATGAGGAATCAGAACCTCTAAGAAGTGAAGCAGATACAGATTCAGATTCTATGGGCTCGGCAGGAAAATGGAATGGATCTGCTTGTCTCGAGGAATCTAAAGAAAATCTTGGCAAGTCATCTCTAAAGTTCCCATCAACTAAATCTACCACTGGAGTTGGGTATGCTTATACATCCTCTGAAGACGAGGATGTCTGTCCAACATGTCTTGAAGGTTGA | 552 | 42.39 | MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHSVSSSIQGATSMNSSASIDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRSEADTDSDSMGSAGKWNGSACLEESKENLGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTCLEG | 183 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 3323929 | 3328875 | + | Tan0019447.4 | Tan11g0415 | 767352 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan11g0415 | 183 | MobiDBLite | consensus disorder prediction | 103 | 123 | - | - | |
| Tan11g0415 | 183 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 1 | 182 | - | GO:0004842(PANTHER) | |
| Tan11g0415 | 183 | MobiDBLite | consensus disorder prediction | 103 | 183 | - | - | |
| Tan11g0415 | 183 | MobiDBLite | consensus disorder prediction | 150 | 168 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan11g0413 | Tan-Chr11:3323558 | Tan11g0415 | Tan-Chr11:3323929 | 6.00E-102 | dispersed | |
| Tan11g0414 | Tan-Chr11:3323929 | Tan11g0415 | Tan-Chr11:3323929 | 4.80E-101 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan11g0415 | - | - | - | 0.0 |