Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0423 ATGAATGCGACGAATAGTTCTCGATTTCAGTCCTTTGGTCAAACAGAGATTAATTGGGACAAGCTTGATAAAGCAAAATTTTATGGCGTTGGAGCTGGTCTCTTTACTGGGATTACAGTAGCACTGTACCCTGTTTCTGTTGTAAAAACGAGAATGCAAGTTGCTGTAAAGGATTCTGCCGAGAAAAATGCTTTGTCTGTTATTAAAGGCTTATTGAAGAATGATGGGGTTCCTGGTCTTTACAGAGGGTTTGGCACAGTTATCACTGGTGCTATTCCTGCAAGGATTATTTTCCTTACCGCTTTGGAGACTACCAAAGTGGGAGCCTTTAAAATGGTCGAGCCATTGAAATTTTCTGAACCCACACAGGCTGCAATAGCAAATGGGTTAGCTGGCATGACTGCATCACTTTTTTCTCAAGCTGTTTTTGTTCCAATTGATGTGATTAGTCAAAAGCTCATGGTTCAAGGATACTCAGGCAATACAAGATATAATGGGGGTTTAGATGTTGCTCGTAAACTGATAAAGTCTAATGGGATCCGGGGATTGTATAAAGGTTTTGGGTTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCATCATCTGGAGGTTCTTAGGCCAAAATTCTGCTTCTGAAAATTTTGCCCCTAGCCATGCTCAACTTATTTCAGTTCAAGCCGCCGGTGGAATGATTGCAGGTGCAACAGCTTCCTGCATTACAACGCCATTGGACACTATAAAGACTCGCTTACAGGTGATGGGTGATAAAGGGAAGACAGCAAGACAAATTGTGGAAAGCTTAATCGCTGAGGATGGATGGAAAGGTTTCTATAGGGGGCTGGGTCCTCGGTTTTTCAGCATGTCAGCCTGGGGAACCTCGATGATATTGGCTTACGAGTACCTGAAGCGGCTGTGTGCAAAAGATGAACAGACTTGA 969 43.24 MNATNSSRFQSFGQTEINWDKLDKAKFYGVGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNALSVIKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGAFKMVEPLKFSEPTQAAIANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNTRYNGGLDVARKLIKSNGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRIIWRFLGQNSASENFAPSHAQLISVQAAGGMIAGATASCITTPLDTIKTRLQVMGDKGKTARQIVESLIAEDGWKGFYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDEQT 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3418696 3425785 + Tan0013455.1 Tan11g0423 767360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0423 322 Gene3D Mitochondrial carrier domain 29 322 IPR023395 -
Tan11g0423 322 PRINTS Mitochondrial carrier protein signature 40 54 IPR002067 GO:0055085(InterPro)
Tan11g0423 322 PRINTS Mitochondrial carrier protein signature 240 262 IPR002067 GO:0055085(InterPro)
Tan11g0423 322 PRINTS Mitochondrial carrier protein signature 184 202 IPR002067 GO:0055085(InterPro)
Tan11g0423 322 SUPERFAMILY Mitochondrial carrier 20 312 IPR023395 -
Tan11g0423 322 FunFam Mitochondrial substrate carrier family protein 28 319 - -
Tan11g0423 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 231 315 IPR018108 -
Tan11g0423 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 20 108 IPR018108 -
Tan11g0423 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 211 IPR018108 -
Tan11g0423 322 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 321 - -
Tan11g0423 322 Pfam Mitochondrial carrier protein 236 318 IPR018108 -
Tan11g0423 322 Pfam Mitochondrial carrier protein 32 107 IPR018108 -
Tan11g0423 322 Pfam Mitochondrial carrier protein 125 212 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4590 Tan-Chr1:111933046 Tan11g0423 Tan-Chr11:3418696 1.00E-70 dispersed
Tan06g0146 Tan-Chr6:1343377 Tan11g0423 Tan-Chr11:3418696 8.80E-70 dispersed
Tan10g1104 Tan-Chr10:10667598 Tan11g0423 Tan-Chr11:3418696 6.30E-86 dispersed
Tan11g0423 Tan-Chr11:3418696 Tan11g0424 Tan-Chr11:3418696 2.10E-174 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0423 K15121 - csv:101206140 613.609