Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g0423 | ATGAATGCGACGAATAGTTCTCGATTTCAGTCCTTTGGTCAAACAGAGATTAATTGGGACAAGCTTGATAAAGCAAAATTTTATGGCGTTGGAGCTGGTCTCTTTACTGGGATTACAGTAGCACTGTACCCTGTTTCTGTTGTAAAAACGAGAATGCAAGTTGCTGTAAAGGATTCTGCCGAGAAAAATGCTTTGTCTGTTATTAAAGGCTTATTGAAGAATGATGGGGTTCCTGGTCTTTACAGAGGGTTTGGCACAGTTATCACTGGTGCTATTCCTGCAAGGATTATTTTCCTTACCGCTTTGGAGACTACCAAAGTGGGAGCCTTTAAAATGGTCGAGCCATTGAAATTTTCTGAACCCACACAGGCTGCAATAGCAAATGGGTTAGCTGGCATGACTGCATCACTTTTTTCTCAAGCTGTTTTTGTTCCAATTGATGTGATTAGTCAAAAGCTCATGGTTCAAGGATACTCAGGCAATACAAGATATAATGGGGGTTTAGATGTTGCTCGTAAACTGATAAAGTCTAATGGGATCCGGGGATTGTATAAAGGTTTTGGGTTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCATCATCTGGAGGTTCTTAGGCCAAAATTCTGCTTCTGAAAATTTTGCCCCTAGCCATGCTCAACTTATTTCAGTTCAAGCCGCCGGTGGAATGATTGCAGGTGCAACAGCTTCCTGCATTACAACGCCATTGGACACTATAAAGACTCGCTTACAGGTGATGGGTGATAAAGGGAAGACAGCAAGACAAATTGTGGAAAGCTTAATCGCTGAGGATGGATGGAAAGGTTTCTATAGGGGGCTGGGTCCTCGGTTTTTCAGCATGTCAGCCTGGGGAACCTCGATGATATTGGCTTACGAGTACCTGAAGCGGCTGTGTGCAAAAGATGAACAGACTTGA | 969 | 43.24 | MNATNSSRFQSFGQTEINWDKLDKAKFYGVGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNALSVIKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGAFKMVEPLKFSEPTQAAIANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNTRYNGGLDVARKLIKSNGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRIIWRFLGQNSASENFAPSHAQLISVQAAGGMIAGATASCITTPLDTIKTRLQVMGDKGKTARQIVESLIAEDGWKGFYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDEQT | 322 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3418696 | 3425785 | + | Tan0013455.1 | Tan11g0423 | 767360 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g0423 | 322 | Gene3D | Mitochondrial carrier domain | 29 | 322 | IPR023395 | - | |
Tan11g0423 | 322 | PRINTS | Mitochondrial carrier protein signature | 40 | 54 | IPR002067 | GO:0055085(InterPro) | |
Tan11g0423 | 322 | PRINTS | Mitochondrial carrier protein signature | 240 | 262 | IPR002067 | GO:0055085(InterPro) | |
Tan11g0423 | 322 | PRINTS | Mitochondrial carrier protein signature | 184 | 202 | IPR002067 | GO:0055085(InterPro) | |
Tan11g0423 | 322 | SUPERFAMILY | Mitochondrial carrier | 20 | 312 | IPR023395 | - | |
Tan11g0423 | 322 | FunFam | Mitochondrial substrate carrier family protein | 28 | 319 | - | - | |
Tan11g0423 | 322 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 231 | 315 | IPR018108 | - | |
Tan11g0423 | 322 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 20 | 108 | IPR018108 | - | |
Tan11g0423 | 322 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 123 | 211 | IPR018108 | - | |
Tan11g0423 | 322 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 10 | 321 | - | - | |
Tan11g0423 | 322 | Pfam | Mitochondrial carrier protein | 236 | 318 | IPR018108 | - | |
Tan11g0423 | 322 | Pfam | Mitochondrial carrier protein | 32 | 107 | IPR018108 | - | |
Tan11g0423 | 322 | Pfam | Mitochondrial carrier protein | 125 | 212 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g4590 | Tan-Chr1:111933046 | Tan11g0423 | Tan-Chr11:3418696 | 1.00E-70 | dispersed | |
Tan06g0146 | Tan-Chr6:1343377 | Tan11g0423 | Tan-Chr11:3418696 | 8.80E-70 | dispersed | |
Tan10g1104 | Tan-Chr10:10667598 | Tan11g0423 | Tan-Chr11:3418696 | 6.30E-86 | dispersed | |
Tan11g0423 | Tan-Chr11:3418696 | Tan11g0424 | Tan-Chr11:3418696 | 2.10E-174 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g0423 | K15121 | - | csv:101206140 | 613.609 |