Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0424 ATGAATGCGACGAATAGTTCTCGATTTCAGTCCTTTGGTCAAACAGAGATTAATTGGGACAAGCTTGATAAAGCAAAATTTTATGGCGTTGGAGCTGGTCTCTTTACTGGGATTACAGTAGCACTGTACCCTGTTTCTGTTGTAAAAACGAGAATGCAAGTTGCTGTAAAGGATTCTGCCGAGAAAAATGCTTTGTCTGTTATTAAAGGCTTATTGAAGAATGATGGGGTTCCTGGTCTTTACAGAGGGTTTGGCACAGTTATCACTGGTGCTATTCCTGCAAGGATTATTTTCCTTACCGCTTTGGAGACTACCAAAGTGGGAGCCTTTAAAATGGTCGAGCCATTGAAATTTTCTGAACCCACACAGGCTGCAATAGCAAATGGGTTAGCTGGCATGACTGCATCACTTTTTTCTCAAGCTGTTTTTGTTCCAATTGATGTGATTAGTCAAAAGCTCATGGTTCAAGGATACTCAGGCAATACAAGATATAATGGGGGTTTAGATGTTGCTCGTAAACTGATAAAGTCTAATGGGATCCGGGGATTGTATAAAGGTTTTGGGTTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCATCATCTGGAGGTTCTTAGGCCAAAATTCTGCTTCTGAAAATTTTGCCCCTAGCCATGCTCAACTTATTTCAGTTCAAGCCGCCGGTGGAATGATTGCAGGTGCAACAGCTTCCTGCATTACAACGCCATTGGACACTATAAAGACTCGCTTACAGGTGATGGGTGATAAAGGGAAGACAGCAAGACAAATTGTGGAAAGCTTAATCGCTGAGGATGGATGGAAAGGTTTCTATAGGGGGCTGGGTCCTCGGTTTTTCAGCATGTCAGCCTGGGGAACCTCGATGATATTGGCTTACGAGTACCTGAGTATGTTCTCCTCACTATATTAA 960 42.81 MNATNSSRFQSFGQTEINWDKLDKAKFYGVGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNALSVIKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGAFKMVEPLKFSEPTQAAIANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNTRYNGGLDVARKLIKSNGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRIIWRFLGQNSASENFAPSHAQLISVQAAGGMIAGATASCITTPLDTIKTRLQVMGDKGKTARQIVESLIAEDGWKGFYRGLGPRFFSMSAWGTSMILAYEYLSMFSSLY 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3418696 3425203 + Tan0013455.2 Tan11g0424 767361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0424 319 SUPERFAMILY Mitochondrial carrier 20 312 IPR023395 -
Tan11g0424 319 FunFam Mitochondrial substrate carrier family protein 28 318 - -
Tan11g0424 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 231 315 IPR018108 -
Tan11g0424 319 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 316 - -
Tan11g0424 319 Pfam Mitochondrial carrier protein 32 107 IPR018108 -
Tan11g0424 319 Pfam Mitochondrial carrier protein 125 212 IPR018108 -
Tan11g0424 319 Pfam Mitochondrial carrier protein 236 313 IPR018108 -
Tan11g0424 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 20 108 IPR018108 -
Tan11g0424 319 PRINTS Mitochondrial carrier protein signature 240 262 IPR002067 GO:0055085(InterPro)
Tan11g0424 319 PRINTS Mitochondrial carrier protein signature 40 54 IPR002067 GO:0055085(InterPro)
Tan11g0424 319 PRINTS Mitochondrial carrier protein signature 184 202 IPR002067 GO:0055085(InterPro)
Tan11g0424 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 211 IPR018108 -
Tan11g0424 319 Gene3D Mitochondrial carrier domain 27 317 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g0423 Tan-Chr11:3418696 Tan11g0424 Tan-Chr11:3418696 2.10E-174 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0424 K15121 - csv:101206140 593.193