Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g0424 | ATGAATGCGACGAATAGTTCTCGATTTCAGTCCTTTGGTCAAACAGAGATTAATTGGGACAAGCTTGATAAAGCAAAATTTTATGGCGTTGGAGCTGGTCTCTTTACTGGGATTACAGTAGCACTGTACCCTGTTTCTGTTGTAAAAACGAGAATGCAAGTTGCTGTAAAGGATTCTGCCGAGAAAAATGCTTTGTCTGTTATTAAAGGCTTATTGAAGAATGATGGGGTTCCTGGTCTTTACAGAGGGTTTGGCACAGTTATCACTGGTGCTATTCCTGCAAGGATTATTTTCCTTACCGCTTTGGAGACTACCAAAGTGGGAGCCTTTAAAATGGTCGAGCCATTGAAATTTTCTGAACCCACACAGGCTGCAATAGCAAATGGGTTAGCTGGCATGACTGCATCACTTTTTTCTCAAGCTGTTTTTGTTCCAATTGATGTGATTAGTCAAAAGCTCATGGTTCAAGGATACTCAGGCAATACAAGATATAATGGGGGTTTAGATGTTGCTCGTAAACTGATAAAGTCTAATGGGATCCGGGGATTGTATAAAGGTTTTGGGTTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCATCATCTGGAGGTTCTTAGGCCAAAATTCTGCTTCTGAAAATTTTGCCCCTAGCCATGCTCAACTTATTTCAGTTCAAGCCGCCGGTGGAATGATTGCAGGTGCAACAGCTTCCTGCATTACAACGCCATTGGACACTATAAAGACTCGCTTACAGGTGATGGGTGATAAAGGGAAGACAGCAAGACAAATTGTGGAAAGCTTAATCGCTGAGGATGGATGGAAAGGTTTCTATAGGGGGCTGGGTCCTCGGTTTTTCAGCATGTCAGCCTGGGGAACCTCGATGATATTGGCTTACGAGTACCTGAGTATGTTCTCCTCACTATATTAA | 960 | 42.81 | MNATNSSRFQSFGQTEINWDKLDKAKFYGVGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNALSVIKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGAFKMVEPLKFSEPTQAAIANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNTRYNGGLDVARKLIKSNGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRIIWRFLGQNSASENFAPSHAQLISVQAAGGMIAGATASCITTPLDTIKTRLQVMGDKGKTARQIVESLIAEDGWKGFYRGLGPRFFSMSAWGTSMILAYEYLSMFSSLY | 319 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3418696 | 3425203 | + | Tan0013455.2 | Tan11g0424 | 767361 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g0424 | 319 | SUPERFAMILY | Mitochondrial carrier | 20 | 312 | IPR023395 | - | |
Tan11g0424 | 319 | FunFam | Mitochondrial substrate carrier family protein | 28 | 318 | - | - | |
Tan11g0424 | 319 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 231 | 315 | IPR018108 | - | |
Tan11g0424 | 319 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 10 | 316 | - | - | |
Tan11g0424 | 319 | Pfam | Mitochondrial carrier protein | 32 | 107 | IPR018108 | - | |
Tan11g0424 | 319 | Pfam | Mitochondrial carrier protein | 125 | 212 | IPR018108 | - | |
Tan11g0424 | 319 | Pfam | Mitochondrial carrier protein | 236 | 313 | IPR018108 | - | |
Tan11g0424 | 319 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 20 | 108 | IPR018108 | - | |
Tan11g0424 | 319 | PRINTS | Mitochondrial carrier protein signature | 240 | 262 | IPR002067 | GO:0055085(InterPro) | |
Tan11g0424 | 319 | PRINTS | Mitochondrial carrier protein signature | 40 | 54 | IPR002067 | GO:0055085(InterPro) | |
Tan11g0424 | 319 | PRINTS | Mitochondrial carrier protein signature | 184 | 202 | IPR002067 | GO:0055085(InterPro) | |
Tan11g0424 | 319 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 123 | 211 | IPR018108 | - | |
Tan11g0424 | 319 | Gene3D | Mitochondrial carrier domain | 27 | 317 | IPR023395 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan11g0423 | Tan-Chr11:3418696 | Tan11g0424 | Tan-Chr11:3418696 | 2.10E-174 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g0424 | K15121 | - | csv:101206140 | 593.193 |