Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0453 ATGCCATGTTCATCGTGGAGCGAGCTTTGCCTGAGGCGTCCCACCCCTCCGCCCAATGCCACCGCCGATGAACCCCCCATCTCCAGCCCTGTCGAGTGCTACGCCTGCACCCAAGTCGGCGTTCCGCCCTTCCACTCCACCAGCTACGACCACGCCCACCAGCAGCCCGAATGGGAGGCCTCCGCCGGCTCTTCCCTCGTCCCCATTCAGCCCACCACCAAGTCCTCCCCTGCCCCGCAACATCCTTCCGGTCCCTTCGGTACCGTTCTCGACCCCAGAACCAAGCCAGTCCAACGATGGAACCGGGCTCTGTTATTGGCCCGTGGAATGGCCCTCGCCGTCGATCCCCTCTACTTCTACGCCCTCTCCATCGGACGTGGTGGCTCCCCCTGCCTCTACATGGACGGCGCTTTAGCCGCCGTCGTCACCGTCCTCCGCACCTTCCTCGATTTCCTCCACTTGTGGCACGTTTGCCTCCAATTCCGACTCGCCTACGTCTCCAAGGAGAGCATGGTCATTGGCTGCGGCAAACTCGTGTGGGACGCACGTGCCATCGCCTCTCACTATCTTCGTTCCTTCAAAGGCTTCTGGTTCGATGCCTTTGTCATCCTCCCACTTCCTCAGATTGTTTATTGGTTGGTTTTACCAAAACTGATCAGAGAAGAGAAAATCAAACTTATAATGACAGTGATCTTATTAATGTTCTTGTTCCAATTCCTCCCAAAAGTTTACCACTCCATTATTTTAATGAGAAGAATGCAAAAGGTCACTGGATACATCTTTGGCACCATTTGGTGGGGTTTTGGCCTCAATCTAATTGCCTATTTCATTGCCTCTCATGTTGCTGGGGGTTGTTGGTATGTTCTTGCAATACAGCGAGTTGCTTCTTGCATTCAGCAACATTGTGAGAGAAAAAAGTGCAATCTATCTCTGTCTTGCTCTGAGGAGGTCTGTTATCAGTTTCTCTCATCAACTACAACGATTGGACATTCATGTGGTCGTAATTCGACTGCTATGTTGAGGAAGCCGCTATGCTTGGATGTCAATGGTCCATTTGCCTATGGCATCTACAAATGGGCTCTTCCAGTCATTTCTAGCAATTCCATTGCAGTGAAAATCCTCTATCCCATCTTTTGGGGCTTAATGACTCTCAGCACCTTTGGCAATGATCTCGAGCCCACGAGTAATTGGCTGGAAGTATGCTTCAGTATTTGCACAGTGCTCAGTGGACTGCTGCTTTTCACTCTCTTGATTGGTAATATCCAGGTTCTTTTGCACGCCGTCATGGCAAGGAGGCGAAAAATGCAGCTGAGATGTCGGGATTTGGAGTGGTGGATGAGGAGACGACAATTGCCGTCTCGTTTGAGACAACGAGTTCGACACTACGAACACCAGAGATGGGCAGCCATGGGCGGAGAAGATGAGATGGAACTAATCAATGATTTGCCTGAAGGTCTTAGAAGAGACATTAAACGCCATCTTTGTGTTGATCTTATCAGAAAGGTGCCTCTGTTCCAAAACCTGGATGAGCTGATTCTCGACAACATCTGCGATCGAGTCAAGCCACTTGTATTCTCCAAAGATGAAAAGATTATCAGAGAAGGAGATCCTGTCCCAAGGATGTTGTTCATAGTGTGTGGACGTGTAAAACGTAGCCAAAGCCTGAGCAAGGGCATGACAGCAACAAGTTTGATCGAACCGGGAGGATTTCTTGGTGACGAGCTGCTATCGTGGTGTCTTCGGCGCCCATTTCTCGAGAGGCTTCCAGCTTCATCAGCTACATTTGTTTCCATTCAACCAACAGAAGCATTTGCCCTGAAAGCAGACCATCTGAAGTACATAACCGATCACTTCCGGTACAAATTCGCCAACGAGCGACTAAAGAGAACTGCAAGATATTACTCTTCCAACTGGAGAACATGGGCTGCTGTGAACATACAATTTGCTTGGCGTCGCTACAGAAAGAGGATGAGACGTCCAGTGATAGCTGTGGTGGAAAATGGAAGCAATGAACGTCGGCTTCTGCAATATGCTGCAATGTTCATGTCATTCAGGCCACATGACCATCTTGAATAG 2076 49.81 MPCSSWSELCLRRPTPPPNATADEPPISSPVECYACTQVGVPPFHSTSYDHAHQQPEWEASAGSSLVPIQPTTKSSPAPQHPSGPFGTVLDPRTKPVQRWNRALLLARGMALAVDPLYFYALSIGRGGSPCLYMDGALAAVVTVLRTFLDFLHLWHVCLQFRLAYVSKESMVIGCGKLVWDARAIASHYLRSFKGFWFDAFVILPLPQIVYWLVLPKLIREEKIKLIMTVILLMFLFQFLPKVYHSIILMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCERKKCNLSLSCSEEVCYQFLSSTTTIGHSCGRNSTAMLRKPLCLDVNGPFAYGIYKWALPVISSNSIAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIGNIQVLLHAVMARRRKMQLRCRDLEWWMRRRQLPSRLRQRVRHYEHQRWAAMGGEDEMELINDLPEGLRRDIKRHLCVDLIRKVPLFQNLDELILDNICDRVKPLVFSKDEKIIREGDPVPRMLFIVCGRVKRSQSLSKGMTATSLIEPGGFLGDELLSWCLRRPFLERLPASSATFVSIQPTEAFALKADHLKYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRKRMRRPVIAVVENGSNERRLLQYAAMFMSFRPHDHLE 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3663641 3669493 + Tan0013982.1 Tan11g0453 767390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0453 691 Gene3D - 131 428 - -
Tan11g0453 691 CDD CAP_ED 504 611 IPR000595 -
Tan11g0453 691 MobiDBLite consensus disorder prediction 60 82 - -
Tan11g0453 691 Gene3D Jelly Rolls 502 620 IPR014710 -
Tan11g0453 691 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 82 658 - -
Tan11g0453 691 MobiDBLite consensus disorder prediction 60 93 - -
Tan11g0453 691 MobiDBLite consensus disorder prediction 1 27 - -
Tan11g0453 691 Pfam Cyclic nucleotide-binding domain 524 612 IPR000595 -
Tan11g0453 691 Gene3D Helix hairpin bin 430 495 - -
Tan11g0453 691 ProSiteProfiles cAMP/cGMP binding motif profile. 504 583 IPR000595 -
Tan11g0453 691 SMART cnmp_10 504 626 IPR000595 -
Tan11g0453 691 SUPERFAMILY Voltage-gated potassium channels 92 426 - -
Tan11g0453 691 SUPERFAMILY cAMP-binding domain-like 431 618 IPR018490 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0444 Tan-Chr1:4120342 Tan11g0453 Tan-Chr11:3663641 4.30E-214 dispersed
Tan01g1603 Tan-Chr1:16298161 Tan11g0453 Tan-Chr11:3663641 9.10E-185 dispersed
Tan10g0130 Tan-Chr10:1398240 Tan11g0453 Tan-Chr11:3663641 5.60E-95 dispersed
Tan10g0131 Tan-Chr10:1414806 Tan11g0453 Tan-Chr11:3663641 3.80E-83 dispersed
Tan11g0453 Tan-Chr11:3663641 Tan07g1336 Tan-Chr7:62795370 4.90E-104 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0453 K05391 - csv:101203560 1284.63