Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g0514 | ATGTTTAGAGAGGTTTGTGTTTTTGAGAGAGCCATGGATTTAGCCCCAGCTGCTATCACTACTAGTAGTAATAACACCAAATCTCCGGAAGCCGAGAGTGATACTCCGACGAGGATCCCGCCCTCCTCCGCCAAATCGCTGCCCTTCAGCAACGGCGTTCTCAAGCGCCACCACTCCCACTCCCACCCCCGTCAACCGCCGCCTCAACCGGTGGTTGTTACTTATAAAGAATGTCTCAAAAATCACGCGGCCAGCTTAGGAGCTCACGCTTTAGACGGATGTGGGGAATTTATGCCCTCCCCTTCTGCGACGCCCACCGATCCCACTTCGCTCAAGTGCGCTGCTTGCGGCTGTCACCGGAATTTCCACCGTCGAGAGCCCGAGGACCCAATTTCGACGTTGGCAATCAATACGGCGGCGACTCATGTGATTGAGTATCAGCCGCACCACCGGCACCACCCGCCTCCCCCGCCGCTGGCTGGCAATCGGAGCCCGAATTCGGCGTCGCCGCCGCCGATCTCGTCGTCGTACTATCCATCAGCGCCGCACATGTTACTGGCGCTTTCGGCCGGGTTGTCGGGTCCTCCGCCGGAAAACGCACAGGCGAATTCGGTACTGACGCCGAGTCCAAACGCGCGAAAACGATTCAGGACGAAATTCACGAACGAGCAGAAGGAAAAAATGCTCGAGTTCGCGGAACGAGTTGGATGGAAAATGCAAAAGAGAGATGAGGATTTGGTTCGAGATTTTTGCAATCAAGTTGGAGTTGAAAGAGGGGTTCTCAAAGTATGGATGCATAACAACAAGAACACCATGGGAAAAAAGACTGAATCTAATGGCGCCGCTGCCACTCCCGCCACCACCGCCACCGCCGCCCCCGCAACCGCCGCCGTCAACAACGATGAAGATGGAGCAGATCATGGTGGCTTGCATATGCATGTTGGCTCAAATGGGTCATCTTCTTCTTCTTGA | 972 | 55.25 | MFREVCVFERAMDLAPAAITTSSNNTKSPEAESDTPTRIPPSSAKSLPFSNGVLKRHHSHSHPRQPPPQPVVVTYKECLKNHAASLGAHALDGCGEFMPSPSATPTDPTSLKCAACGCHRNFHRREPEDPISTLAINTAATHVIEYQPHHRHHPPPPPLAGNRSPNSASPPPISSSYYPSAPHMLLALSAGLSGPPPENAQANSVLTPSPNARKRFRTKFTNEQKEKMLEFAERVGWKMQKRDEDLVRDFCNQVGVERGVLKVWMHNNKNTMGKKTESNGAAATPATTATAAPATAAVNNDEDGADHGGLHMHVGSNGSSSSS | 323 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4353834 | 4355466 | + | Tan0002620.1 | Tan11g0514 | 767451 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g0514 | 323 | MobiDBLite | consensus disorder prediction | 196 | 212 | - | - | |
Tan11g0514 | 323 | MobiDBLite | consensus disorder prediction | 19 | 70 | - | - | |
Tan11g0514 | 323 | FunFam | Zinc-finger homeodomain protein 2 | 200 | 274 | - | - | |
Tan11g0514 | 323 | SUPERFAMILY | Homeodomain-like | 207 | 274 | IPR009057 | - | |
Tan11g0514 | 323 | NCBIfam | ZF-HD homeobox protein Cys/His-rich dimerization domain | 74 | 126 | IPR006456 | - | |
Tan11g0514 | 323 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 75 | 126 | IPR006456 | - | |
Tan11g0514 | 323 | MobiDBLite | consensus disorder prediction | 271 | 323 | - | - | |
Tan11g0514 | 323 | MobiDBLite | consensus disorder prediction | 271 | 295 | - | - | |
Tan11g0514 | 323 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 53 | 271 | - | GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0050793(PANTHER) | |
Tan11g0514 | 323 | MobiDBLite | consensus disorder prediction | 147 | 176 | - | - | |
Tan11g0514 | 323 | Gene3D | - | 200 | 274 | - | - | |
Tan11g0514 | 323 | MobiDBLite | consensus disorder prediction | 19 | 49 | - | - | |
Tan11g0514 | 323 | MobiDBLite | consensus disorder prediction | 189 | 212 | - | - | |
Tan11g0514 | 323 | Pfam | ZF-HD protein dimerisation region | 73 | 127 | IPR006456 | - | |
Tan11g0514 | 323 | NCBIfam | homeobox domain, ZF-HD class | 213 | 270 | IPR006455 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan11g0514 | Tan-Chr11:4353834 | Tan11g2213 | Tan-Chr11:61205966 | 3.80E-35 | dispersed | |
Tan11g0514 | Tan-Chr11:4353834 | Tan11g0515 | Tan-Chr11:4381257 | 1.60E-12 | tandem | |
Tan07g1215 | Tan-Chr7:49924779 | Tan11g0514 | Tan-Chr11:4353834 | 4.40E-78 | transposed | |
Tan05g2155 | Tan-Chr5:72287668 | Tan11g0514 | Tan-Chr11:4353834 | 1.60E-30 | transposed | |
Tan11g0514 | Tan-Chr11:4353834 | Tan04g1081 | Tan-Chr4:9709979 | 2.60E-52 | wgd | |
Tan11g0514 | Tan-Chr11:4353834 | Tan05g2442 | Tan-Chr5:75562217 | 4.10E-13 | wgd | |
Tan11g0514 | Tan-Chr11:4353834 | Tan09g2126 | Tan-Chr9:71530229 | 3.20E-13 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28667 | PF04770 | ZF-HD_dimer | 3.60E-29 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g0514 | - | - | - | 0.0 |