Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g0515 | ATGAGGAAGCGTCAAGTTGTGCTTAGAAGATCAGAAGAACCATCAAGAGACACTGTGGCTTCATCTTTCACAGTAAGGAGTGTTAGATATGGGGAGTGCCAAAAGAACCACGCCGCCGGAGTCGGAGGGTATGCTGTCGACGGGTGCCGAGAATTCATGGCGAGTGGCGACGAAGGGACGACCGCTGCACTGACTTGCGCCGCCTGCGGTTGCCACCGGAGCTTCCATAGAAGACAAGTTGGAACTGAGGTAGTCTGTGATTGCTCTTCATCTCCCTCAAATGGAACTTGA | 291 | 52.92 | MRKRQVVLRRSEEPSRDTVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRSFHRRQVGTEVVCDCSSSPSNGT | 96 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4381257 | 4382124 | + | Tan0016977.1 | Tan11g0515 | 767452 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g0515 | 96 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 18 | 79 | - | GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0050793(PANTHER) | |
Tan11g0515 | 96 | Pfam | ZF-HD protein dimerisation region | 28 | 80 | IPR006456 | - | |
Tan11g0515 | 96 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 30 | 79 | IPR006456 | - | |
Tan11g0515 | 96 | NCBIfam | ZF-HD homeobox protein Cys/His-rich dimerization domain | 29 | 79 | IPR006456 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g2442 | Tan-Chr5:75562217 | Tan11g0515 | Tan-Chr11:4381257 | 5.10E-26 | dispersed | |
Tan09g2126 | Tan-Chr9:71530229 | Tan11g0515 | Tan-Chr11:4381257 | 5.20E-25 | dispersed | |
Tan11g0514 | Tan-Chr11:4353834 | Tan11g0515 | Tan-Chr11:4381257 | 1.60E-12 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28668 | PF04770 | ZF-HD_dimer | 7.90E-30 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g0515 | - | - | - | 0.0 |