Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0522 ATGGCGGAACCAGTAGCAGAGCCCAAGGCATTACCCGACCCCGAAAAGAAGAAGGAACAGAGCCTTCCTTTTCATCAACTCTTCTCTTTTGCAGACAAATACGACTGGTTTCTCATGATCCTCGGCAGTTTAGGCGCCGTTGTCCACGGCTCTTCCATGCCCGTTTTTTTCCTCCTTTTCGGCGAAATGGTTAATGGCTTCGGCAAAAATCAATCCAATTTTCACAAAATGACATCAGAAGTCTCTAAGTATGCTCTGTATTTTGTCTACTTGGGTCTCATCGTCTGTTTCTCATCCTACGCCGAGATCGCATGTTGGATGTACACAGGGGAGAGACAAGTGAGCACGTTGAGAAAGAAGTATTTAGAGGCTGTTTTGAAACAAGATGTTGGATTCTTCGACACTGATGCCAGAACAGGGGATGTTGTTTTCAGCGTCTCTACAGACACTCTTCTTGTTCAAGATGCAATCAGCGAGAAGGTGGGGAACTTCATTCACTATCTCTCGACGTTTTTGGCTGGATTAGTGGTGGGTTTTGTATCAGCATGGAGACTAGCACTTTTAAGTATAGCAGTAATTCCAGGAATCGCTTTTGCTGGTGGTTTATATGCTTATACTCTCACTGGACTCACTTCAAAGAGTCGAGAATCCTATGCCAATGCTGGCATTATTGCCGAACAGGCGATTGCTCAAGTTCGAACTGTTTACTCGTATGTTGGGGAAAGCAAAGCCCTGAATGCGTATTCAGATTTAATTCAGAATACATTGAAAATTGGATACAAGGCAGGAATGGCCAAGGGATTGGGCCTTGGTTGTACTTATGGGATTGCTTGTATGTCTTGGGCTCTTGTCTTCTGGTACGCCGGCGTCTTCATCCGAAATGGCCAGACCGATGGCGGGAAAGCCTTCACTGCTATATTCTCCGCCATCGTCGGTGGCATGAGTTTGGGGCAGTCCTTTTCAAACTTGGGAGCATTCAGCAAAGGCAAAGCAGCAGGGTACAAATTGATGGAGATAATTAACCAAAGGCCTTCAATTATTCAAGACCCATTAGATGGGAAATGCTTGGGTGAAGTCAATGGCAATATTGAGTTCAAAGATGTCACCTTTAGCTACCCTTCAAGGCCGGACGTGATGATCTTCAGGGATTTCTCCATTTTCTTCCCGGCCGGGAAGACTGTCGCTGTCGTTGGCGGTAGCGGTTCCGGGAAAAGCACTGTTGTTTCTCTCATTGAAAGATTCTACGACCCCAATCAAGGGCAAGTTCTGCTGGACAATGTGGACATAAAGACATTGCAATTGAAATGGCTACGTGATCAAATTGGATTAGTGAACCAAGAACCAGCTCTGTTTGCAACCACCATATATGAAAACATTCTCTATGGCAAACCAGACGCAACGGCGGCCGAGGTCGAAGCTGCCGCGGCTGCAGCCAACGCTCATAGTTTCATCACATTGCTCCCCAATGGCTACAACACCCAGGTCGGCGAAAGAGGGTTGCAACTCTCAGGTGGCCAAAAACAGAGGATTGCCATAGCCAGAGCAATGTTGAAGAACCCCAAAATCCTTCTCCTCGATGAAGCCACCAGCGCCCTCGATGCAGGCTCTGAGAGCATAGTTCAAGAAGCTTTAGACCGTTTAATGGTGGGAAGAACAACGGTGGTGGTCGCCCATCGATTATCAACCATAAGAAATGTCGATTCAATTGCAGTGATACAACAGGGGCAGGTCGTCGAAACAGGAACTCACGAAGAACTAATTGCCAAATCCGGAGCTTATTCCTCATTAATTCGCTTCCAAGAAATGGTTCGAAACAGAGAATTCTCAAACCCGTCGACCCGTCGAACACGATCTTCACGGCTGAGCCATTCGTTATCGACAAAATCGTTAAGCCTCCGCTCCGGCAGCCTTCGAAATTTGAGCTATTCGTACAGCACCGGCGCCGACGGGAGAATCGAAATGGTCTCGAACGCTGAAACTGACCGGAAAAATCCAGCCCCAGATGGCTATTTCATTCGTCTTCTTAAACTCAACGGCCCCGAATGGCCTTATTCGATAATGGGCGCTGTTGGGTCTGTTCTCTCTGGTTTCATCAGTCCAACATTCGCCATTGTTATGAGCAACATGATCGAGGTCTTCTACTACAGAAATTCATCCGCCATGGAAAGGAAAATCAAGGAATTCGTATTCATCTACATTGGAATTGGAGTTTACGCAGTGGTGGCTTATCTAATTCAGCATTATTTCTTTACAATCATGGGTGAGAATCTCACTACCAGAGTCAGAAGAATGATGCTCGCAGCCATTTTGAGGAATGAAGTGGGATGGTTCGATGAGGAAGAACACAACTCAAGTTTAGTAGCAGCAAAATTAGCCACTGATGCAGCCGATGTGAAATCCGCCATTGCTGAAAGAATATCAGTGATTCTGCAAAATATGACTTCACTCTTCACTTCTTTCATTGTTGCATTCATTGTTGAATGGAGAGTCTCTCTTCTCATCCTTGCAGCCTTCCCTCTACTGGTTCTTGCCAACATGGCTCAGCAACTTTCTTTGAAAGGATTTGCCGGGGATACTGCAAAGGCCCACGCAAAGACAAGTATGATTGCAGGGGAAGGTGTTAGCAATATCAGAACAGTGGCTGCCTTCAATGCTCAAGACAAGATCCTTTCTCTGTTCCGCCATGAGCTTCGTGTCCCACAGCGGCAGAGCCTTCGTCGGAGTCAAACAGCGGGGGTTCTTTTCGGCATTTCGCAGCTTGCTCTATATGCCTCGGAAGCTCTGGTTCTTTGGTATGGTGTTCATTTGGTTAGCAATGGTGGATCAACATTCTCCAAAGTGATTAAAGTCTTTGTTGTCTTGGTTGTTACTGCCAATTCTGTGGCGGAGACTGTTAGTCTAGCTCCTGAGATCATTCGGGGTGGCGAGTCGATCGGTTCTGTTTTCTCCATTCTCGATCGCTCGACGAGAATCGACCCTGATGACCCTGAGGCAGAGCCTGTCGAGACACTTCGTGGGGAAATCGAACTTCGACATGTCGACTTTGCGTACCCATCTCGACCTGATGTCATGGTGTTTAAGGATCTTAATCTCAGGATCAGAGCTGGTCAAAGCCAGGCTTTGGTTGGAGCCAGTGGATCAGGGAAGAGTTCTGTGATTGCCTTGATCGAGAGATTCTACGATCCGATCGCCGGGAAAGTTATGATCGACGGGAAGGACATTCGTCGACTGAATTTGCAATCCTTGAGGCTAAAAATTGGGTTGGTACAGCAAGAGCCAGCCCTGTTTGCAGCAAGCATTTTTGACAACATTGCATATGGAAAAGATGGAGCAACAGAGGCTGAAGTGATAGAGGCAGCAAGAGCAGCCAATGTGCATGGCTTTGTAAGTGGACTGCCTGATGGCTACAAGACACCAGTTGGGGAAAGGGGCGTTCAACTTTCTGGTGGCCAAAAGCAACGCATTGCTATTGCTAGGGCCGTTCTCAAGGACCCCACAATCCTCCTCCTCGACGAAGCCACGAGCGCCCTCGATGCCGAGTCAGAGTGTGTGCTACAAGAGGCTCTGGAAAGGCTGATGAGGGGTCGAACCACGGTGCTCGTGGCGCATCGGCTGTCAACAATCAGGGGCGTCGACAGCATCGGTGTAGTGCAAGATGGGCGCATCCTGGAGCAAGGCAGCCATAGCGAGCTGCTAAGCCGAGCCGAGGGGGCTTACTCAAGGCTTTTGCAGCTGCAACACCAACACATATGA 3753 47.96 MAEPVAEPKALPDPEKKKEQSLPFHQLFSFADKYDWFLMILGSLGAVVHGSSMPVFFLLFGEMVNGFGKNQSNFHKMTSEVSKYALYFVYLGLIVCFSSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDVVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNAYSDLIQNTLKIGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIINQRPSIIQDPLDGKCLGEVNGNIEFKDVTFSYPSRPDVMIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNQGQVLLDNVDIKTLQLKWLRDQIGLVNQEPALFATTIYENILYGKPDATAAEVEAAAAAANAHSFITLLPNGYNTQVGERGLQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDSIAVIQQGQVVETGTHEELIAKSGAYSSLIRFQEMVRNREFSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSNAETDRKNPAPDGYFIRLLKLNGPEWPYSIMGAVGSVLSGFISPTFAIVMSNMIEVFYYRNSSAMERKIKEFVFIYIGIGVYAVVAYLIQHYFFTIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAAKLATDAADVKSAIAERISVILQNMTSLFTSFIVAFIVEWRVSLLILAAFPLLVLANMAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQDKILSLFRHELRVPQRQSLRRSQTAGVLFGISQLALYASEALVLWYGVHLVSNGGSTFSKVIKVFVVLVVTANSVAETVSLAPEIIRGGESIGSVFSILDRSTRIDPDDPEAEPVETLRGEIELRHVDFAYPSRPDVMVFKDLNLRIRAGQSQALVGASGSGKSSVIALIERFYDPIAGKVMIDGKDIRRLNLQSLRLKIGLVQQEPALFAASIFDNIAYGKDGATEAEVIEAARAANVHGFVSGLPDGYKTPVGERGVQLSGGQKQRIAIARAVLKDPTILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDSIGVVQDGRILEQGSHSELLSRAEGAYSRLLQLQHQHI 1250
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 4464064 4470817 + Tan0018193.1 Tan11g0522 767459
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0522 1250 ProSitePatterns ABC transporters family signature. 1147 1161 IPR017871 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan11g0522 1250 FunFam ABC transporter B family member 1 665 974 - -
Tan11g0522 1250 CDD ABC_MTABC3_MDL1_MDL2 363 600 - -
Tan11g0522 1250 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 357 600 IPR027417 -
Tan11g0522 1250 Pfam ABC transporter 1027 1175 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan11g0522 1250 Pfam ABC transporter 383 530 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan11g0522 1250 FunFam ABC transporter B family member 19 998 1247 - -
Tan11g0522 1250 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 363 599 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan11g0522 1250 Gene3D ABC transporter type 1, transmembrane domain 86 982 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Tan11g0522 1250 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 40 328 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Tan11g0522 1250 PANTHER ABC TRANSPORTER B FAMILY 12 621 IPR039421 GO:0005887(PANTHER)|GO:0042626(PANTHER)
Tan11g0522 1250 SMART AAA_5 1035 1221 IPR003593 GO:0016887(InterPro)
Tan11g0522 1250 SMART AAA_5 390 582 IPR003593 GO:0016887(InterPro)
Tan11g0522 1250 CDD ABC_6TM_Pgp_ABCB1_D1_like 39 336 - -
Tan11g0522 1250 Gene3D - 998 1250 IPR027417 -
Tan11g0522 1250 SUPERFAMILY ABC transporter transmembrane region 673 987 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Tan11g0522 1250 CDD ABC_6TM_Pgp_ABCB1_D2_like 675 991 - -
Tan11g0522 1250 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 998 1246 IPR027417 -
Tan11g0522 1250 FunFam ABC transporter B family member 19 353 601 - -
Tan11g0522 1250 CDD ABC_MTABC3_MDL1_MDL2 1008 1246 - -
Tan11g0522 1250 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1010 1244 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan11g0522 1250 SUPERFAMILY ABC transporter transmembrane region 27 349 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Tan11g0522 1250 Pfam ABC transporter transmembrane region 39 312 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Tan11g0522 1250 Pfam ABC transporter transmembrane region 686 956 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Tan11g0522 1250 Gene3D - 361 624 IPR027417 -
Tan11g0522 1250 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 686 973 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Tan11g0522 1250 FunFam ABC transporter B family member 1 26 360 - -
Tan11g0522 1250 ProSitePatterns ABC transporters family signature. 502 516 IPR017871 GO:0005524(InterPro)|GO:0016887(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g5038 Tan-Chr1:115959953 Tan11g0522 Tan-Chr11:4464064 6.00E-304 dispersed
Tan05g1552 Tan-Chr5:33886509 Tan11g0522 Tan-Chr11:4464064 3.90E-261 dispersed
Tan05g2344 Tan-Chr5:74888178 Tan11g0522 Tan-Chr11:4464064 2.20E-95 dispersed
Tan06g0097 Tan-Chr6:979794 Tan11g0522 Tan-Chr11:4464064 9.70E-275 dispersed
Tan06g0098 Tan-Chr6:979794 Tan11g0522 Tan-Chr11:4464064 1.90E-254 dispersed
Tan07g0256 Tan-Chr7:5530315 Tan11g0522 Tan-Chr11:4464064 6.50E-72 dispersed
Tan07g1999 Tan-Chr7:71669247 Tan11g0522 Tan-Chr11:4464064 0.00E+00 dispersed
Tan07g2000 Tan-Chr7:71669247 Tan11g0522 Tan-Chr11:4464064 0.00E+00 dispersed
Tan08g0992 Tan-Chr8:15358577 Tan11g0522 Tan-Chr11:4464064 1.50E-300 dispersed
Tan08g0994 Tan-Chr8:15474789 Tan11g0522 Tan-Chr11:4464064 4.20E-268 dispersed
Tan08g1711 Tan-Chr8:68859594 Tan11g0522 Tan-Chr11:4464064 7.00E-52 dispersed
Tan11g0522 Tan-Chr11:4464064 Tan11g0565 Tan-Chr11:4993471 1.20E-302 dispersed
Tan11g0522 Tan-Chr11:4464064 Tan08g1860 Tan-Chr8:70858074 0.00E+00 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0522 K05658 - csv:101212585 2275.74