Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan11g0535 | ATGGGGGATAAGGATGAAGTTTTGGAGGCTGTTGTGAAGGAAGCTGTTGATTTGGAGAACGTGCCACTTGAAGAGGTTTTTCAGACTTTGAGGTGTAATACTAATGGTTTGACAACAGAGGCGGCTCGTGAGAGGTTGGCCATTTTTGGCCACAACAAGCTTGAAGAAAAGAAGGAGAGCAAGGTTTTGAAGTTCTTGGGGTTTATGTGGAACCCTCTCTCATGGGTCATGGAAGCTGCAGCTATAATGGCTATTGCTCTAGCTAATGGAGGAGGAAAGCCTCCAGATTGGCAAGATTTTGTTGGGATCATAACCTTGTTACTTATCAATTCAACTATTAGTTTTATAGAGGAGAACAATGCTGGAAATGCTGCAGCCGCTCTCATGGCTCGTCTTGCACCAAAAGCTAAGGTTCTTAGAGATGGGAAGTGGGTTGAGGAGGAAGCATCAGTTCTTGTTCCTGGTGATATAATTAGCGTCAAGCTCGGTGACATAATTCCTGCTGATTCTCGCCTCCTTGAAGGTGATCCGCTGAAGATCGATCAATCTGCTCTCACGGGCGAATCACTTCCTGTGACTAAAGGCCCTGGCGACAGTGTCTATTCAGGTTCGACATGCAAACAGGGAGAAATTGAAGCAGTTGTGATTGCTACTGGTGTTCATACCTTCTTTGGCAAAGCTGCTCATCTCGTGGACTCCACAAACCAAGTGGGTCACTTCCAAAAGGTCTTGACTGCTATTGGAAATTTCTGCATATGTTCCATTGCTGTGGGCATGATCGTGGAGATTATTGTTATGTACCCAATCCAACATCGGGCGTACCGTCCAGGGATCGACAATCTCCTGGTTCTTCTCATTGGAGGAATTCCTATTGCCATGCCAACTGTTTTGTCGGTCACGATGGCAATTGGATCACATCGTCTATCTCAACAGGGAGCTATCACTAAACGAATGACTGCAATAGAAGAAATGGCTGGAATGGACGTGCTTTGCAGCGACAAAACAGGAACACTGACCTTAAATAAGCTTACTGTTGACAAGACTTTGATAGAGGTTTTCGCCAAGGGAGTGGATGTAGATACCGTTGTTCTCATGGCAGCTCAAGCCTCCCGAGTTGAAAATCAAGATGCAATAGATGCTGCTATAGTAGGGATGTTAAGTGATCCAAAGGAGGCACGAGCAGGCATTCAAGAGGTCCACTTCCTTCCATTCAACCCAACTGACAAGCGAACTGCCCTAACATACATTGATGGTGATGGTAAAATGCATCGGGTCAGCAAAGGTGCTCCAGAGCAGATCTTGAATCTTGCACACAACAAATCAGAGATAGAAAGAAGAGTTCATGCTATAATCGACAAGTTCGCCGAGCGAGGATTGCGATCTCTTGCAGTGGCATACCAAGAAGTTCCAGAAGGAAGGAAGGAGAGTCGTGGAGGGTCATGGCAATTTATTGGCCTAATGCCTCTGTTTGACCCACCAAGACATGATAGTGCAGAGACAATTAGGAGGGCTTTGAATCTTGGTGTAAATGTTAAAATGATCACAGGTGATCAACTGGCTATAGGTAAGGAAACAGGACGTCGACTCGGGATGGGAACAAATATGTACCCTTCATCTGCATTATTAGGACAGAACAAAGATGAATCAATATCCGGATTGCCTGTTGATGACTTAATTGAAAAGGCTGATGGATTTGCTGGTGTATTTCCTGAGCACAAATATGAGATTGTGAAACGTTTACAAGCTCGAAAACATATATGTGGAATGACCGGAGATGGCGTTAATGATGCTCCTGCTCTTAAAAAGGCCGATATTGGCATAGCAGTTGCAGATGCAACCGATGCAGCTCGTAGCGCTTCTGATATTGTCCTTACAGAGCCTGGTCTTAGTGTTATTATAAGCGCTGTTCTAACCAGCAGGGCCATCTTCCAGAGGATGAAAAATTACACGATTTATGCAGTTTCAATTACAATTCGTATTGTGCTTGGATTCATGTTGCTGGCCCTTATATATCAATTTGACTTCCCACCCTTCATGGTTCTGATCATTGCTATTCTTAATGATGGCACCATAATGACAATATCAAAGGATAGAGTGAAACCATCTCCTCTGCCAGATAGCTGGAAACTAGCAGAGATTTTTGGCACTGGAATTATACTTGGAGGTTATTTGGCTATGATGACCGTTATTTTCTTCTGGGCGGCTTACAGAACTGACTTCTTTCCTCGTACGTTTGGGGTTTCTAGCCTTCAGAAGAAGGATGAGGATGATTTCAGAAAGCTAGCTTCAGCAATATACCTCCAAGTGAGTACAATTAGTCAGGCCCTCATCTTTGTTACACGATCTCGGAGTTGGTCGTTTGTGGAGCGTCCTGGCCTGTTATTGGTTGCAGCTTTCATTATTGCTCAGCTGATTGCTACACTGATTGCTGTCTATGCAAACTGGAGTTTTGCTGCAATAGAAGGAATTGGCTGGGGCTGGGCTGGTGTGGTTTGGCTTTACAACCTCATCTTTTATTTCCCACTTGATCTAATCAAGTTTGCAATCAGATATGCCATTAGTGGTAGGGCGTGGGACCTTGTCATTGAACAAAGGATTGCCTTTACAAGGAAGAAGGATTTTGGGAAGGAAGAGCGTGAGCTCAAATGGGCACATGCACAAAGGACACTTCATGGGCTGCAGCCACCTGAGGCTAAGATGTTTTCCGAGCGCACAACTTATACAGAACTCAATCAAATGGCTGAAGAAGCAAAACGACGTGCTGAAATTGCAAGGCTGAGAGAGCTGCACACACTGAAAGGCCATGTTGAGTCAGTGGTGAGGCTGAAGGGTCTTGATATCAACACTATTCAGCAGTCATACACAGTATAG | 2871 | 44.65 | MGDKDEVLEAVVKEAVDLENVPLEEVFQTLRCNTNGLTTEAARERLAIFGHNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWVEEEASVLVPGDIISVKLGDIIPADSRLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLIEVFAKGVDVDTVVLMAAQASRVENQDAIDAAIVGMLSDPKEARAGIQEVHFLPFNPTDKRTALTYIDGDGKMHRVSKGAPEQILNLAHNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPEGRKESRGGSWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESISGLPVDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIYQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFGTGIILGGYLAMMTVIFFWAAYRTDFFPRTFGVSSLQKKDEDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGLLLVAAFIIAQLIATLIAVYANWSFAAIEGIGWGWAGVVWLYNLIFYFPLDLIKFAIRYAISGRAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLQPPEAKMFSERTTYTELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDINTIQQSYTV | 956 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 4655129 | 4661209 | - | Tan0009752.1 | Tan11g0535 | 767472 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan11g0535 | 956 | SUPERFAMILY | HAD-like | 327 | 637 | IPR036412 | - | |
| Tan11g0535 | 956 | Coils | Coil | 907 | 927 | - | - | |
| Tan11g0535 | 956 | Gene3D | - | 96 | 821 | - | - | |
| Tan11g0535 | 956 | Pfam | Cation transporter/ATPase, N-terminus | 20 | 83 | IPR004014 | - | |
| Tan11g0535 | 956 | Gene3D | - | 905 | 956 | - | - | |
| Tan11g0535 | 956 | SMART | Cation_ATPase_N_a_2 | 17 | 89 | IPR004014 | - | |
| Tan11g0535 | 956 | NCBIfam | plasma-membrane proton-efflux P-type ATPase | 36 | 812 | IPR006534 | GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro) | |
| Tan11g0535 | 956 | Gene3D | - | 328 | 627 | IPR023214 | - | |
| Tan11g0535 | 956 | CDD | P-type_ATPase_H | 36 | 847 | IPR006534 | GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro) | |
| Tan11g0535 | 956 | PRINTS | H+-transporting ATPase (proton pump) signature | 590 | 606 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan11g0535 | 956 | PRINTS | H+-transporting ATPase (proton pump) signature | 621 | 646 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan11g0535 | 956 | PRINTS | H+-transporting ATPase (proton pump) signature | 766 | 787 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan11g0535 | 956 | PRINTS | H+-transporting ATPase (proton pump) signature | 447 | 465 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan11g0535 | 956 | PRINTS | H+-transporting ATPase (proton pump) signature | 562 | 578 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan11g0535 | 956 | SUPERFAMILY | Calcium ATPase, transduction domain A | 134 | 231 | IPR008250 | - | |
| Tan11g0535 | 956 | SFLD | C1.7: P-type atpase like | 313 | 641 | - | - | |
| Tan11g0535 | 956 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 17 | 852 | IPR023298 | - | |
| Tan11g0535 | 956 | Pfam | E1-E2 ATPase | 132 | 310 | - | - | |
| Tan11g0535 | 956 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 333 | 339 | IPR018303 | - | |
| Tan11g0535 | 956 | FunFam | Plasma membrane ATPase | 343 | 490 | - | - | |
| Tan11g0535 | 956 | SFLD | p-type atpase | 313 | 641 | IPR044492 | - | |
| Tan11g0535 | 956 | FunFam | Plasma membrane ATPase | 134 | 218 | - | - | |
| Tan11g0535 | 956 | Pfam | haloacid dehalogenase-like hydrolase | 327 | 604 | - | - | |
| Tan11g0535 | 956 | Gene3D | - | 343 | 490 | IPR023299 | GO:0000166(InterPro) | |
| Tan11g0535 | 956 | NCBIfam | HAD-IC family P-type ATPase | 565 | 673 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan11g0535 | 956 | NCBIfam | HAD-IC family P-type ATPase | 103 | 352 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan11g0535 | 956 | PRINTS | P-type cation-transporting ATPase superfamily signature | 331 | 345 | - | - | |
| Tan11g0535 | 956 | PRINTS | P-type cation-transporting ATPase superfamily signature | 590 | 609 | - | - | |
| Tan11g0535 | 956 | PRINTS | P-type cation-transporting ATPase superfamily signature | 485 | 496 | - | - | |
| Tan11g0535 | 956 | PRINTS | P-type cation-transporting ATPase superfamily signature | 613 | 625 | - | - | |
| Tan11g0535 | 956 | PRINTS | P-type cation-transporting ATPase superfamily signature | 181 | 195 | - | - | |
| Tan11g0535 | 956 | PRINTS | P-type cation-transporting ATPase superfamily signature | 507 | 517 | - | - | |
| Tan11g0535 | 956 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 19 | 887 | - | GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER) | |
| Tan11g0535 | 956 | FunFam | Plasma membrane ATPase | 483 | 638 | - | - | |
| Tan11g0535 | 956 | Gene3D | - | 134 | 218 | - | - | |
| Tan11g0535 | 956 | FunFam | ATPase 4 plasma membrane-type | 575 | 821 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan09g2167 | Tan-Chr9:71750215 | Tan11g0535 | Tan-Chr11:4655129 | 0.00E+00 | dispersed | |
| Tan11g0535 | Tan-Chr11:4655129 | Tan05g2073 | Tan-Chr5:71172590 | 0.00E+00 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan11g0535 | K01535 | - | csv:101211115 | 1772.29 |