Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0560 ATGAAGATCTCCTCCAACTTCTTCGTCACATGGGTCTCTCTGAATCATCTTCTTTTTCTTCTTCTACTTTGTGCTTCTCCATCTTTTTGCGCAGTTCCAGAAGACGACATAAGGTGTCTTCGAGGGGTTAAGAATTCGCTCGTTGATCCTCTCGGGAAGCTCAGTTCCTGGGATTTCAAGAACACATCCGTCGGCAATCTCTGCAACAAGTTCGTCGGACTCTCGTGCTGGAACGACCGGGAGAATCGCATTCTGAGCCTTGAGCTCAGAGATATGAAGCTCTCCGGTTCGATTTCCGAGGACTTGCAGTACTGTGTGAGCCTGCAGAGACTGGATCTGTCCGGCAATACCTTTTCCGGCGCGATCCCGCCGCATATTTGTAAGTGGCTTCCGTATTTGGTTACTTTGGACTTGTCCAACAATCAATTTTCCGGCCCTATTCCGGCTGATCTCGCCGGATGTTCATATCTGAATTCGTTGATTTTGTCTGATAATGGGCTTTCGGGTACGATACCTGTTGAGCTTACGAGTTTGGGTAGGCTTAACAAATTTTCTGTTGCGAACAATCATCTCACTGGTTCGGTTCCCCCATTTTTTGATAAATTTGGGAAGGAGGATTTTGATGGGAACAGTGACTTATGTGGAGGGCCTGTTGGATCGAGCTGTGGTGGGTTGAGCAAAAAGAATCTGGCGATTATTATAGCAGCTGGTGTGTTTGGTGCTGCAGCTTCTCTGTTGTTAGGTTTTGGGCTGTGGTGGTGGTATCACTCTAGAATGAACATGAAGAAGAGAAGGGGATATGGGGATGGGATTAGTGGGGATTGGGCTGATAGGTTGAGAGCCTATAAGTTAGTTCAAGTATCCTTGTTTCAAAAGCCTCTTGTGAAAGTTAAGTTGGCTGATTTGATGGCTGCTACTAACAATTTCAATTCGGAAAATATAATAGTTACTTCTAGAACTGGAACAACTTATAGAGCTGTTCTTCCCGATGGCTCTGTGCTCGCTATAAAGCGGCTCAATACCTGCAAGCTCGGCGAGAAGCTGTTTAGGATGGAGATGAACCGGTTAGGATTGATAAGACACCCGAATTTGACACCCCTTTTGGGATTCTGTGTTGTGGAAGAGGAAAAGCTTTTGGTTTATAAGTATATGTCTAATGGGACCTTGTCCTCTTTGTTACATGGAAATGGTGAGGTATTGGATTGGCCAACTAGGTTTAGGATCGGTCTTGGTGCGGCTAGGGGTCTTGCTTGGCTTCACCATGGATGCCAACCTCCATTCATGCATCAAAACATATGTTCTAGTGTAATTCTTGTGGATGAAGACTACGATGCTAGAATCATGGATTTTGGATTGGCAAGGTTGATGGCTTCGGATTCTCACGACAGCAGTTTTGTTAATGGAGATCTAGGGGAACTTGGTTACGTCGCTCCTGAATATCCGAGCACCATGGTTGCTTCTCTGAAGGGGGATGTTTATGGATTTGGGGTTGTGCTTTTGGAATTGGTCACTGGCCAAAAACCTCTGGAAGTCACCAAAGCTGAGGAAGGCTATAAGGGTAACTTGGTGGATTGGGTTATTCAGCTAAGTAGTTCAGGTCGAATTAAGGACGTTATCGATAAAGATCTTTGTGGAAAAGGGAATGACGAGGAAATCTTACAATTTCTGAAAATTACAATGAACTGCATTGTTTCTCGGCCCAAGGACAGGTGGTCTATGTATCAGGTTTATCAGTCAATGAAAGCAATGGCTAAAGACTACAGTTTCTCTGAACCAGATGATGAGTTCCCACTTTTACTCGGGAAGGGAGATAACGAACCCGTGTAG 1827 44.99 MKISSNFFVTWVSLNHLLFLLLLCASPSFCAVPEDDIRCLRGVKNSLVDPLGKLSSWDFKNTSVGNLCNKFVGLSCWNDRENRILSLELRDMKLSGSISEDLQYCVSLQRLDLSGNTFSGAIPPHICKWLPYLVTLDLSNNQFSGPIPADLAGCSYLNSLILSDNGLSGTIPVELTSLGRLNKFSVANNHLTGSVPPFFDKFGKEDFDGNSDLCGGPVGSSCGGLSKKNLAIIIAAGVFGAAASLLLGFGLWWWYHSRMNMKKRRGYGDGISGDWADRLRAYKLVQVSLFQKPLVKVKLADLMAATNNFNSENIIVTSRTGTTYRAVLPDGSVLAIKRLNTCKLGEKLFRMEMNRLGLIRHPNLTPLLGFCVVEEEKLLVYKYMSNGTLSSLLHGNGEVLDWPTRFRIGLGAARGLAWLHHGCQPPFMHQNICSSVILVDEDYDARIMDFGLARLMASDSHDSSFVNGDLGELGYVAPEYPSTMVASLKGDVYGFGVVLLELVTGQKPLEVTKAEEGYKGNLVDWVIQLSSSGRIKDVIDKDLCGKGNDEEILQFLKITMNCIVSRPKDRWSMYQVYQSMKAMAKDYSFSEPDDEFPLLLGKGDNEPV 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4903226 4906062 - Tan0017661.1 Tan11g0560 767497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0560 608 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 33 223 - -
Tan11g0560 608 Pfam Protein tyrosine and serine/threonine kinase 333 516 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan11g0560 608 ProSiteProfiles Protein kinase domain profile. 309 583 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g0560 608 SUPERFAMILY Protein kinase-like (PK-like) 286 579 IPR011009 -
Tan11g0560 608 Gene3D Ribonuclease Inhibitor 34 224 IPR032675 -
Tan11g0560 608 Gene3D Phosphorylase Kinase; domain 1 269 383 - -
Tan11g0560 608 Pfam Leucine rich repeat N-terminal domain 34 77 IPR013210 -
Tan11g0560 608 SUPERFAMILY L domain-like 30 207 - -
Tan11g0560 608 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 53 582 IPR051564 GO:0016020(PANTHER)
Tan11g0560 608 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 271 383 - -
Tan11g0560 608 Gene3D Transferase(Phosphotransferase) domain 1 384 596 - -
Tan11g0560 608 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 384 602 - -
Tan11g0560 608 Pfam Leucine rich repeat 107 167 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1125 Tan-Chr6:11101104 Tan11g0560 Tan-Chr11:4903226 5.50E-115 dispersed
Tan06g1126 Tan-Chr6:11101104 Tan11g0560 Tan-Chr11:4903226 5.50E-115 dispersed
Tan11g0560 Tan-Chr11:4903226 Tan11g1708 Tan-Chr11:16748592 5.00E-60 dispersed
Tan11g0560 Tan-Chr11:4903226 Tan04g1751 Tan-Chr4:46525028 1.30E-55 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68182 PF07714 PK_Tyr_Ser-Thr 7.40E-29 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0560 - - - 0.0