Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0586 ATGGTCGGCGGCCCCTACTACACCGTCTTCCTCGGTCGCAAAGACGCCAAGATTTCTAGAGCCTCTGCCATTGAAGGCACGCTCCCCAGACCCTCCATGTCCGTCTCTGAGATCATCGGAATCTTCGCCTCAAGAGGATTTTCCGTTCAGGAAATGGTGGCTCTAAGCGGCGCTCATTCGATTGGCTTCTCCCATTGCAAGGAGTTTTCCTCTGGGATCTTCAATTACAGCAAATCGCCGCCCTACGACAACCATTACAACCCTAGGTTCGCATTAGGGTTACAGAGAGCTTGCGCCGACTACCAGAAGAATCCGACTCTGTCCGTTTTCAACGACATCATGACGCCGAACAAATTCGACAACATGTATTTCAAGAATCTGCAGAACGGATTAGGGCTTCTGAAATCCGACGGCGGATTTTACAGCGATTCAAGAACCCGGCCGTGGGTGGAGAAATACGCAGCAGATGAGAGGGCGTTCTTCGAGGCGTTTTCTCGAGCAATGGTGAAGCTCGGTGGCTATGGCGTCAAAGTGGGAAACGAAGGAGAAATTAGACGCAGGTGCGATGCCTTTAATTGA 579 51.47 MVGGPYYTVFLGRKDAKISRASAIEGTLPRPSMSVSEIIGIFASRGFSVQEMVALSGAHSIGFSHCKEFSSGIFNYSKSPPYDNHYNPRFALGLQRACADYQKNPTLSVFNDIMTPNKFDNMYFKNLQNGLGLLKSDGGFYSDSRTRPWVEKYAADERAFFEAFSRAMVKLGGYGVKVGNEGEIRRRCDAFN 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5212357 5212935 - Tan0006120.1 Tan11g0586 767523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0586 192 FunFam Peroxidase 29 171 - -
Tan11g0586 192 Gene3D - 2 192 - -
Tan11g0586 192 PRINTS Plant peroxidase signature 110 125 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0586 192 PRINTS Plant peroxidase signature 166 179 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0586 192 PRINTS Plant peroxidase signature 3 18 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0586 192 PRINTS Plant peroxidase signature 126 143 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0586 192 PRINTS Plant peroxidase signature 50 62 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0586 192 Gene3D Peroxidase, domain 2 29 171 - -
Tan11g0586 192 Pfam Peroxidase 2 156 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0586 192 ProSiteProfiles Plant heme peroxidase family profile. 1 192 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0586 192 PANTHER - 1 192 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0586 192 PRINTS Haem peroxidase superfamily signature 112 127 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0586 192 PRINTS Haem peroxidase superfamily signature 51 66 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0586 192 PRINTS Haem peroxidase superfamily signature 3 15 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan11g0586 192 ProSitePatterns Peroxidases proximal heme-ligand signature. 51 61 IPR019793 -
Tan11g0586 192 SUPERFAMILY Heme-dependent peroxidases 2 192 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g0586 Tan-Chr11:5212357 Tan03g1646 Tan-Chr3:72558800 3.20E-45 dispersed
Tan11g0586 Tan-Chr11:5212357 Tan05g2038 Tan-Chr5:70579068 3.30E-58 wgd
Tan11g0586 Tan-Chr11:5212357 Tan07g1310 Tan-Chr7:60975823 4.70E-73 wgd
Tan11g0586 Tan-Chr11:5212357 Tan09g2202 Tan-Chr9:72126561 2.20E-54 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0586 K00430 - csv:105435603 345.125