Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g0586 | ATGGTCGGCGGCCCCTACTACACCGTCTTCCTCGGTCGCAAAGACGCCAAGATTTCTAGAGCCTCTGCCATTGAAGGCACGCTCCCCAGACCCTCCATGTCCGTCTCTGAGATCATCGGAATCTTCGCCTCAAGAGGATTTTCCGTTCAGGAAATGGTGGCTCTAAGCGGCGCTCATTCGATTGGCTTCTCCCATTGCAAGGAGTTTTCCTCTGGGATCTTCAATTACAGCAAATCGCCGCCCTACGACAACCATTACAACCCTAGGTTCGCATTAGGGTTACAGAGAGCTTGCGCCGACTACCAGAAGAATCCGACTCTGTCCGTTTTCAACGACATCATGACGCCGAACAAATTCGACAACATGTATTTCAAGAATCTGCAGAACGGATTAGGGCTTCTGAAATCCGACGGCGGATTTTACAGCGATTCAAGAACCCGGCCGTGGGTGGAGAAATACGCAGCAGATGAGAGGGCGTTCTTCGAGGCGTTTTCTCGAGCAATGGTGAAGCTCGGTGGCTATGGCGTCAAAGTGGGAAACGAAGGAGAAATTAGACGCAGGTGCGATGCCTTTAATTGA | 579 | 51.47 | MVGGPYYTVFLGRKDAKISRASAIEGTLPRPSMSVSEIIGIFASRGFSVQEMVALSGAHSIGFSHCKEFSSGIFNYSKSPPYDNHYNPRFALGLQRACADYQKNPTLSVFNDIMTPNKFDNMYFKNLQNGLGLLKSDGGFYSDSRTRPWVEKYAADERAFFEAFSRAMVKLGGYGVKVGNEGEIRRRCDAFN | 192 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 5212357 | 5212935 | - | Tan0006120.1 | Tan11g0586 | 767523 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g0586 | 192 | FunFam | Peroxidase | 29 | 171 | - | - | |
Tan11g0586 | 192 | Gene3D | - | 2 | 192 | - | - | |
Tan11g0586 | 192 | PRINTS | Plant peroxidase signature | 110 | 125 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Tan11g0586 | 192 | PRINTS | Plant peroxidase signature | 166 | 179 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Tan11g0586 | 192 | PRINTS | Plant peroxidase signature | 3 | 18 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Tan11g0586 | 192 | PRINTS | Plant peroxidase signature | 126 | 143 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Tan11g0586 | 192 | PRINTS | Plant peroxidase signature | 50 | 62 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Tan11g0586 | 192 | Gene3D | Peroxidase, domain 2 | 29 | 171 | - | - | |
Tan11g0586 | 192 | Pfam | Peroxidase | 2 | 156 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Tan11g0586 | 192 | ProSiteProfiles | Plant heme peroxidase family profile. | 1 | 192 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Tan11g0586 | 192 | PANTHER | - | 1 | 192 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Tan11g0586 | 192 | PRINTS | Haem peroxidase superfamily signature | 112 | 127 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Tan11g0586 | 192 | PRINTS | Haem peroxidase superfamily signature | 51 | 66 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Tan11g0586 | 192 | PRINTS | Haem peroxidase superfamily signature | 3 | 15 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Tan11g0586 | 192 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 51 | 61 | IPR019793 | - | |
Tan11g0586 | 192 | SUPERFAMILY | Heme-dependent peroxidases | 2 | 192 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan11g0586 | Tan-Chr11:5212357 | Tan03g1646 | Tan-Chr3:72558800 | 3.20E-45 | dispersed | |
Tan11g0586 | Tan-Chr11:5212357 | Tan05g2038 | Tan-Chr5:70579068 | 3.30E-58 | wgd | |
Tan11g0586 | Tan-Chr11:5212357 | Tan07g1310 | Tan-Chr7:60975823 | 4.70E-73 | wgd | |
Tan11g0586 | Tan-Chr11:5212357 | Tan09g2202 | Tan-Chr9:72126561 | 2.20E-54 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g0586 | K00430 | - | csv:105435603 | 345.125 |