Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0598 ATGGCGGGAAGATACTTAATGGAAGGCGTTCTTCCATTTCCGGCGATGATAACGATGGAGTGTATCAACGTCGGCCTCAATACTCTTTTCAAAGCCGCCACCGCCTCCGGCATGAGCCACCACGTCTTCGTCGTCTACTCTTACTCCCTCGCCGCCCTTCTCCTCCTCCCTTCTCCCTTCATCTCTCACAGATCGAGGCGACTTCCACCGCTCAATTTCTCTGTACTCTCGAAGATCGCTCTCCTCGGACTCATCGGTTCTTCTTCGCAGATAATGGGATACACGGGAATCAATTACAGTTCTCCGACTCTCGCTTCCGCCATCAGCAACCTTGTTCCTGCTTTCACTTTCATTCTCGCCGTCATTTTCAGGATGGAGAAAGTGGTATTGAAAAGCAATAGCAGTCAAGCAAAAGTGATGGGCACTATAATATCAATATCAGGTGCATTTGTAGTCACTCTTTACAAGGGTCCAAGGATCATACTCTCTTCAGCACCCATATCTCTTTCACTTCATCACCCACTAACCTCTTCAGATTCTAATTGGGTTATTGGCAGCCTTCTCTTGACTGCTGAATATATCTTGGTTCCACTTTGGTACATTGTTCAGACAAAAATAATGAAGGAATACCCAGAAGAGGCAACAGTGATCTTCTTCTACAATTTAACTGTGGCCATCATATCTGCAGTTGTAGGAGTGATTTTAGAGACAGATCCAAGTGCTTGGATTTTGAGGCAAAATACAGCATTGGCCTCTGTTTTATGCTCTGGACTTTTTGGATCATGCTTGAATAATACAGTTCACACATGGGCACTCCGCTTGAAAGGGCCGGTGTTCGTAGCAATGTTTAAGCCGCTGTCAATTGTTGTCGCTATTGTAATGGGTGTTCTGTTTCTTGGTGATTCTCTATATCTTGGAAGTCTTATTGGAGCATCCATAATATCCATAGGGTTTTATACTGTAATGTGGGGGAAAACAAAAGAAGAAATGGGTGATAAAGAGATAAAAGAAGACCATAGCCATAATCTTACTGGTAACAAGGAATCACATGAAGATCATAGAGTACCTCTTCTTGGAAGCCACAACACACAGAGATACAGTTCAGATCATGTATGA 1116 43.82 MAGRYLMEGVLPFPAMITMECINVGLNTLFKAATASGMSHHVFVVYSYSLAALLLLPSPFISHRSRRLPPLNFSVLSKIALLGLIGSSSQIMGYTGINYSSPTLASAISNLVPAFTFILAVIFRMEKVVLKSNSSQAKVMGTIISISGAFVVTLYKGPRIILSSAPISLSLHHPLTSSDSNWVIGSLLLTAEYILVPLWYIVQTKIMKEYPEEATVIFFYNLTVAIISAVVGVILETDPSAWILRQNTALASVLCSGLFGSCLNNTVHTWALRLKGPVFVAMFKPLSIVVAIVMGVLFLGDSLYLGSLIGASIISIGFYTVMWGKTKEEMGDKEIKEDHSHNLTGNKESHEDHRVPLLGSHNTQRYSSDHV 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5309320 5316555 - Tan0000855.1 Tan11g0598 767535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0598 371 Pfam EamA-like transporter family 198 322 IPR000620 GO:0016020(InterPro)
Tan11g0598 371 Pfam EamA-like transporter family 24 153 IPR000620 GO:0016020(InterPro)
Tan11g0598 371 MobiDBLite consensus disorder prediction 339 358 - -
Tan11g0598 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 156 - -
Tan11g0598 371 PANTHER WAT1-RELATED PROTEIN 15 337 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan11g0598 371 MobiDBLite consensus disorder prediction 339 371 - -
Tan11g0598 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 326 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1327 Tan-Chr7:62236284 Tan11g0598 Tan-Chr11:5309320 4.10E-78 dispersed
Tan11g0598 Tan-Chr11:5309320 Tan11g1295 Tan-Chr11:11026334 1.90E-46 dispersed
Tan11g0598 Tan-Chr11:5309320 Tan11g0599 Tan-Chr11:5329032 1.70E-74 tandem
Tan11g0598 Tan-Chr11:5309320 Tan07g1326 Tan-Chr7:62132719 2.70E-48 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0598 - - - 0.0