Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g0598 | ATGGCGGGAAGATACTTAATGGAAGGCGTTCTTCCATTTCCGGCGATGATAACGATGGAGTGTATCAACGTCGGCCTCAATACTCTTTTCAAAGCCGCCACCGCCTCCGGCATGAGCCACCACGTCTTCGTCGTCTACTCTTACTCCCTCGCCGCCCTTCTCCTCCTCCCTTCTCCCTTCATCTCTCACAGATCGAGGCGACTTCCACCGCTCAATTTCTCTGTACTCTCGAAGATCGCTCTCCTCGGACTCATCGGTTCTTCTTCGCAGATAATGGGATACACGGGAATCAATTACAGTTCTCCGACTCTCGCTTCCGCCATCAGCAACCTTGTTCCTGCTTTCACTTTCATTCTCGCCGTCATTTTCAGGATGGAGAAAGTGGTATTGAAAAGCAATAGCAGTCAAGCAAAAGTGATGGGCACTATAATATCAATATCAGGTGCATTTGTAGTCACTCTTTACAAGGGTCCAAGGATCATACTCTCTTCAGCACCCATATCTCTTTCACTTCATCACCCACTAACCTCTTCAGATTCTAATTGGGTTATTGGCAGCCTTCTCTTGACTGCTGAATATATCTTGGTTCCACTTTGGTACATTGTTCAGACAAAAATAATGAAGGAATACCCAGAAGAGGCAACAGTGATCTTCTTCTACAATTTAACTGTGGCCATCATATCTGCAGTTGTAGGAGTGATTTTAGAGACAGATCCAAGTGCTTGGATTTTGAGGCAAAATACAGCATTGGCCTCTGTTTTATGCTCTGGACTTTTTGGATCATGCTTGAATAATACAGTTCACACATGGGCACTCCGCTTGAAAGGGCCGGTGTTCGTAGCAATGTTTAAGCCGCTGTCAATTGTTGTCGCTATTGTAATGGGTGTTCTGTTTCTTGGTGATTCTCTATATCTTGGAAGTCTTATTGGAGCATCCATAATATCCATAGGGTTTTATACTGTAATGTGGGGGAAAACAAAAGAAGAAATGGGTGATAAAGAGATAAAAGAAGACCATAGCCATAATCTTACTGGTAACAAGGAATCACATGAAGATCATAGAGTACCTCTTCTTGGAAGCCACAACACACAGAGATACAGTTCAGATCATGTATGA | 1116 | 43.82 | MAGRYLMEGVLPFPAMITMECINVGLNTLFKAATASGMSHHVFVVYSYSLAALLLLPSPFISHRSRRLPPLNFSVLSKIALLGLIGSSSQIMGYTGINYSSPTLASAISNLVPAFTFILAVIFRMEKVVLKSNSSQAKVMGTIISISGAFVVTLYKGPRIILSSAPISLSLHHPLTSSDSNWVIGSLLLTAEYILVPLWYIVQTKIMKEYPEEATVIFFYNLTVAIISAVVGVILETDPSAWILRQNTALASVLCSGLFGSCLNNTVHTWALRLKGPVFVAMFKPLSIVVAIVMGVLFLGDSLYLGSLIGASIISIGFYTVMWGKTKEEMGDKEIKEDHSHNLTGNKESHEDHRVPLLGSHNTQRYSSDHV | 371 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 5309320 | 5316555 | - | Tan0000855.1 | Tan11g0598 | 767535 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g0598 | 371 | Pfam | EamA-like transporter family | 198 | 322 | IPR000620 | GO:0016020(InterPro) | |
Tan11g0598 | 371 | Pfam | EamA-like transporter family | 24 | 153 | IPR000620 | GO:0016020(InterPro) | |
Tan11g0598 | 371 | MobiDBLite | consensus disorder prediction | 339 | 358 | - | - | |
Tan11g0598 | 371 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 50 | 156 | - | - | |
Tan11g0598 | 371 | PANTHER | WAT1-RELATED PROTEIN | 15 | 337 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
Tan11g0598 | 371 | MobiDBLite | consensus disorder prediction | 339 | 371 | - | - | |
Tan11g0598 | 371 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 242 | 326 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan07g1327 | Tan-Chr7:62236284 | Tan11g0598 | Tan-Chr11:5309320 | 4.10E-78 | dispersed | |
Tan11g0598 | Tan-Chr11:5309320 | Tan11g1295 | Tan-Chr11:11026334 | 1.90E-46 | dispersed | |
Tan11g0598 | Tan-Chr11:5309320 | Tan11g0599 | Tan-Chr11:5329032 | 1.70E-74 | tandem | |
Tan11g0598 | Tan-Chr11:5309320 | Tan07g1326 | Tan-Chr7:62132719 | 2.70E-48 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g0598 | - | - | - | 0.0 |