Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0608 ATGGATTCGAGCTTGTTCTGGGGTCATCCTGAAAAGAGGGATTCATGGAGGACGATTTTCACTTTGGCTTATCAGAGTTTGGGGGTTGTTTATGGGGATTTGAGCACTTCTCCTCTGTATGTGTACAAAAGCACTTTTGCAGAAAACATTCAGCACTCTGAGACGAATGAGGAGGTTTATGGGGTTCTTTGCTTTGTGTTTTGGACTTTGACACTTATCCCTTTACTTAAATATGTGTTCATAGTTCTTAGAGCTGATGATAATGGCGAAGGGGGAACTTTTGCTCTGTATTCACTGCTCTGCCGCCATGCCCGGCTTAGCTCCCTTCCAAATCACCAACTTGCAGATGAGGAGCTTTCTGCTTATACAAGAGATAGACCTGAATCCACTAGTAATTCTAGTTTTAGTTCTTGGCTGAAATCAACTTTGGAGAAGTGTAAAGTTTTGCAAAGAATGTTGCTTGTTCTTGCCTTGATTGGGACTTGCATGGTTATTGGAGATGGAGTTCTCACACCAGCAATTTCAGTTTTTTCAGCTGTGTCAGGGCTTGAGTTATCCATGGCTAAGGAACATCACCAGTATATCGAAGTCCCTCTCGCGTGTGGCATATTGGTATTCTTATTCGCATTGCAACATTATGGAACGCATCAGGTCGGCTTCCTGTTTGCTCCAGTTGTAATTGTATGGCTTCTATGCATCAGTGCCATTGGTTTGTACAATATCTTCTACTGGAATCCCCTGGTTTACAAAGCACTCTCCCCATACTACATGTATAAGTTCTTGAAAAAAACCAAAAAACAAGGTTGGATGGCGTTGGGCGGAATCCTCTTGTGTATAACAGGCTCAGAAGCTATGTTTGCTGATCTTGGACACTTCTCACAGTTTTCTATCAAGCTTGCTTTCACTTTTGCGGTTTATCCATCCTTAGTTCTTGCATATATGGGACAAGCTGCTTATCTTTCTAAGCATCACAATCTCGACAATGATTATCGAATCGGATTCTACGTTTCTGTTCCTGAGAAAGTAAGATGGCCAGTTCTTGCAATAGCAATACTTGCAGCAGTGGTGGGCAGTCAAGCAATCATCACCGGCACGTTTTCGATCATCAAACAATGTTTTTCTTTGGGTTGTTTTCCGAGGGTAAAGATCATTCACACGTCTTTGAAAATACATGGCCAGATTTACATTCCCCTGATCAACTGGATACTAATGATATTATGTTTGGCTGTGACCATTGGGTTTAGAGACACAAAACGCTTGGGCAATGCAGCAGGGTTGGCAGTTATTACGGTTATGCTGGTCTCGACGTGTCTAATGTCTCTTGTTATTGTGTTATGTTGGCATAAAAGTGTGTTGTTGGCGATAGCGTTCTTAGTCTTCTTTGGCTGCATAGAAGCTCTCTACTTGTCTGCATCTCTTATTAAGTTCTTTGAAGGGGCTTGGGTTCCTATTGCACTTTCACTGACCTTCCTTGTGGTTATGTATGTTTGGCACTATGGCACTGTAAAGAAATATGAGGCTGATGTTGAAAACAAAGTCCCTATTAATTGGCTCCTCAGTATAGGTCCCAAAATCGGGGTGGTTCGGGTTCGGGGGATCGGCCTTGTACATACCGAACTCGTTTCGGGGATCCCTGCCATATTCTCTCATTTTGTCACCAACCTTCCAGCGTTTCACCAAATTCTAGTGTTCCTGTGCATAAAATCTGTGACAGTGCCTCGTGTGAGGCCTGAGGAAAGATTCTTAGTTGGAAGAGTTGGGGGAAAGGAGCATCGACTGTACCGTTGTATCGTACGTTATGGATACCGTGATGTGCACAAAGATGACTTGGAGTTTGAGAGAGATCTTGCTTGTAGCATTGCAGAATTCATACGATGTGAGAGAACAGATGAATGCAACAGTTATAGAGATGAAGATCACTTGGATGACAATGAAAGAATGACAGTGATTGGGACTTCATCAACTCAAGTAGAGGGTATACGAATGTTTGAAAATGAAGCATACTCTTCTTCACCCATCATTGGCACTTCTTCAGAGATAAAATCAGAGAGGTTGAGGAAAAGGGTAAGGTTTGTTCTACCAAAAATGGATATGGATATTGATATGGATAGAAGGGGAGAGTTGCAAGAGTTGATGGAAGCAAGAGAGGCAGGAATAGCATTCATAATGGGACATTCATATGTAAAGGCAAAGAAAGGATCAGGTTGGATGAAGAAGCTTGTGATTAATTATGGTTATGATTTCTTGAGGAAAAATTCAAGAAGGCCATCTTATGCTTTGAGTATTCCTTATGCTTCTACTCTTGAGGTTGGTATGGTTTATTATGTTTAA 2331 41.83 MDSSLFWGHPEKRDSWRTIFTLAYQSLGVVYGDLSTSPLYVYKSTFAENIQHSETNEEVYGVLCFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARLSSLPNHQLADEELSAYTRDRPESTSNSSFSSWLKSTLEKCKVLQRMLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMAKEHHQYIEVPLACGILVFLFALQHYGTHQVGFLFAPVVIVWLLCISAIGLYNIFYWNPLVYKALSPYYMYKFLKKTKKQGWMALGGILLCITGSEAMFADLGHFSQFSIKLAFTFAVYPSLVLAYMGQAAYLSKHHNLDNDYRIGFYVSVPEKVRWPVLAIAILAAVVGSQAIITGTFSIIKQCFSLGCFPRVKIIHTSLKIHGQIYIPLINWILMILCLAVTIGFRDTKRLGNAAGLAVITVMLVSTCLMSLVIVLCWHKSVLLAIAFLVFFGCIEALYLSASLIKFFEGAWVPIALSLTFLVVMYVWHYGTVKKYEADVENKVPINWLLSIGPKIGVVRVRGIGLVHTELVSGIPAIFSHFVTNLPAFHQILVFLCIKSVTVPRVRPEERFLVGRVGGKEHRLYRCIVRYGYRDVHKDDLEFERDLACSIAEFIRCERTDECNSYRDEDHLDDNERMTVIGTSSTQVEGIRMFENEAYSSSPIIGTSSEIKSERLRKRVRFVLPKMDMDIDMDRRGELQELMEAREAGIAFIMGHSYVKAKKGSGWMKKLVINYGYDFLRKNSRRPSYALSIPYASTLEVGMVYYV 776
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5393187 5397106 - Tan0017970.1 Tan11g0608 767545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0608 776 Pfam K+ potassium transporter C-terminal domain 532 774 IPR053952 -
Tan11g0608 776 Pfam K+ potassium transporter integral membrane domain 22 519 IPR053951 -
Tan11g0608 776 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 776 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Tan11g0608 776 NCBIfam potassium uptake protein 22 776 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1213 Tan-Chr4:11348551 Tan11g0608 Tan-Chr11:5393187 5.2e-314 dispersed
Tan04g1407 Tan-Chr4:16057729 Tan11g0608 Tan-Chr11:5393187 2.50E-282 dispersed
Tan07g0027 Tan-Chr7:2196538 Tan11g0608 Tan-Chr11:5393187 1.50E-247 dispersed
Tan08g2370 Tan-Chr8:75053506 Tan11g0608 Tan-Chr11:5393187 1.30E-222 dispersed
Tan08g2371 Tan-Chr8:75055197 Tan11g0608 Tan-Chr11:5393187 1.50E-176 dispersed
Tan11g0001 Tan-Chr11:14632 Tan11g0608 Tan-Chr11:5393187 2.40E-119 dispersed
Tan11g0002 Tan-Chr11:14632 Tan11g0608 Tan-Chr11:5393187 1.10E-182 dispersed
Tan11g0608 Tan-Chr11:5393187 Tan11g0609 Tan-Chr11:5393187 0.00E+00 tandem
Tan05g3037 Tan-Chr5:82332079 Tan11g0608 Tan-Chr11:5393187 1.20E-149 transposed
Tan11g0608 Tan-Chr11:5393187 Tan07g1332 Tan-Chr7:62505389 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0608 K03549 - csv:101218141 1401.34