Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0630 ATGCCTTGCATTGAACATCTCGACGCAGTTGCTAGCAACAATGCTGGGAATATTTTGCTTGATTCTAATGGTACAGTCAAGTTAGCGGATTTTGGAGTTTCAGCTTGCATGTTTGATACTGGAGATAGGCAACGCTCAAGAAACACATTTGTTGGAACTCCTTGCTGGATGGCACCTGAAGTTATGCAGCAATTACATGGATATGACTTCAAGGCAGACATTTGGTCATTTGGAATAACAGCGCTTGAACTGGCTCATGGGCATGCTCCGTTTTCTAAATACCCACCAATGAAAGTTTTGCTAATGACATTACAGAATGCTCCTCCTGGTCTTGACTATGAAAGAGATAGGAGATTTTCCAAGTCGTTCAAAGAAATGGTTGCTACATGCCTAGTGAAGGATCCAAAGAAACGGCCAAGTTCAGAGAAGCTTTTAAAGCACCCTTTTTTCAAACATGCCCGTTCAGTTGATTATCTTGCTCGAACAATCCTGGATGGCCTCGATCCATTAGGGGAACGTTTTAAGAAGCTAAAGGCAAAAGAGGCTGATCTTCTGGGGCAGAACAAGGCTTTGTATGGAGATAAGGAGCATTTGTCACAGCAAGAGTATATTCGAGGAATTAGTGCCTGGAACTTCAACCTTGAGGATTTAAAGAATCAGGCTGCCCTTATTCAAGATGACGATATGTCAAACATAGAAGATCTTGATGTACATACAACAAAGCAAAGAAACAAGAATAATGATTTTAGCTTTCCAGTAGAGGGTTCATCCCTTGTAAGGCTGAATCACCCAACTGCTGCAGCTAATCAGGAGGATGGTTTCAATGATCTTCATGATTTGGAGAGTTCCCTTGCTTCTTTCCCGATAAAACCTCTTGAAGCACTCAAAGATTGTTTTGACATCTATGAAGATATAAGCACGGACAGTGTAAGACCAGTGGAGAGAGAAAATGGAAGAACCGAGGGTGAGAGTTCAGGGCAAAGTGGTTCCTTACCACGCCATTACATGTCAGAGACTAAGAGGTCTTTCAGTGGTTCATTAATTTCTGACAATGCTCTTTCTCCTAAAAAAAATATTGTAGATGGTGATAGGGATTATTTGCAGTCGAAACTTCCATCTGAGCGTAATTACAGTGGTCCATTATTATATCGCCAGAAAAGAGACACAAATAACGTTTCATCTGTTGAGGATTCATCAGATGGAACAGTTGTTCAACGTAAGGGGCGGTTTAAAGTTACTTCAGCAGAGCTTAGTCCGAAGGGTCCTATGACGGGCTCATTTAGCCCAGTCTGTGGAGGGACGATAAGTCCAACATCCCTGAACCTTACGCCTGCTCTACTCCTCCCATCAATGCAATGCATTTTACAGCAGAACATCCTGCAACGGGAAGAAATTGTTAAATTGATCAAGTATTTGGAACAAATGACTGATGTATCAGAGACGGTCACCAGTGACCTTCTGCAGATACCACCGGCTTCCTTGAGGGAAAGAGAGTTACAGTCTCAGATCGTTCATCTGCAACAGAGAATTGATAATCTCGTGGAGGAATTAGAGAAGCAGAAGTTGAAAAATGCAGAGTTTGAAAGACGCATGATCTCTATGGCAAATTAA 1611 42.02 MPCIEHLDAVASNNAGNILLDSNGTVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRRFSKSFKEMVATCLVKDPKKRPSSEKLLKHPFFKHARSVDYLARTILDGLDPLGERFKKLKAKEADLLGQNKALYGDKEHLSQQEYIRGISAWNFNLEDLKNQAALIQDDDMSNIEDLDVHTTKQRNKNNDFSFPVEGSSLVRLNHPTAAANQEDGFNDLHDLESSLASFPIKPLEALKDCFDIYEDISTDSVRPVERENGRTEGESSGQSGSLPRHYMSETKRSFSGSLISDNALSPKKNIVDGDRDYLQSKLPSERNYSGPLLYRQKRDTNNVSSVEDSSDGTVVQRKGRFKVTSAELSPKGPMTGSFSPVCGGTISPTSLNLTPALLLPSMQCILQQNILQREEIVKLIKYLEQMTDVSETVTSDLLQIPPASLRERELQSQIVHLQQRIDNLVEELEKQKLKNAEFERRMISMAN 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5534404 5546437 + Tan0011370.2 Tan11g0630 767567

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0630 536 MobiDBLite consensus disorder prediction 310 334 - -
Tan11g0630 536 Pfam Protein kinase domain 16 150 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g0630 536 MobiDBLite consensus disorder prediction 383 401 - -
Tan11g0630 536 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 14 526 IPR047173 GO:0043539(InterPro)
Tan11g0630 536 MobiDBLite consensus disorder prediction 370 402 - -
Tan11g0630 536 Gene3D Transferase(Phosphotransferase) domain 1 13 185 - -
Tan11g0630 536 SMART serkin_6 1 150 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan11g0630 536 Coils Coil 496 530 - -
Tan11g0630 536 SUPERFAMILY Protein kinase-like (PK-like) 15 151 IPR011009 -
Tan11g0630 536 ProSiteProfiles Protein kinase domain profile. 1 150 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0630 K08835 - - csv:101205102 992.645
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1361 Tan-Chr7:63711653 Tan11g0630 Tan-Chr11:5534404 3.00E-132 dispersed
Tan11g0630 Tan-Chr11:5534404 Tan01g0227 Tan-Chr1:2023667 6.40E-19 dispersed
Tan11g0629 Tan-Chr11:5528399 Tan11g0630 Tan-Chr11:5534404 1.30E-300 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tan01g4377 . 1 692 MAP Kinase Kinase Kinase Kinase AT1G53165 62.9 3.3e-225 778.9
Tan04g0983 . 268 533 MAP Kinase Kinase Kinase Kinase AT1G53165 50.9 2.4e-66 251.1
Tan04g0984 . 268 533 MAP Kinase Kinase Kinase Kinase AT1G53165 50.9 2.4e-66 251.1
Tan04g0985 . 268 533 MAP Kinase Kinase Kinase Kinase AT1G53165 50.9 2.4e-66 251.1
Tan04g0986 . 268 533 MAP Kinase Kinase Kinase Kinase AT1G53165 50.9 2.4e-66 251.1
Tan01g4377 . 1 691 MAP Kinase Kinase Kinase Kinase AT3G15220 65.1 1.4e-231 800.0
Tan04g0983 . 268 533 MAP Kinase Kinase Kinase Kinase AT3G15220 50.6 1.1e-66 252.3
Tan04g0984 . 268 533 MAP Kinase Kinase Kinase Kinase AT3G15220 50.6 1.1e-66 252.3
Tan04g0985 . 268 533 MAP Kinase Kinase Kinase Kinase AT3G15220 50.6 1.1e-66 252.3
Tan04g0986 . 268 533 MAP Kinase Kinase Kinase Kinase AT3G15220 50.6 1.1e-66 252.3
Tan04g0983 . 4 846 MAP Kinase Kinase Kinase Kinase AT1G69220 59.0 8.2e-244 840.9
Tan04g0984 . 4 846 MAP Kinase Kinase Kinase Kinase AT1G69220 59.0 8.2e-244 840.9
Tan04g0985 . 4 846 MAP Kinase Kinase Kinase Kinase AT1G69220 59.0 8.2e-244 840.9
Tan04g0986 . 4 846 MAP Kinase Kinase Kinase Kinase AT1G69220 59.0 8.2e-244 840.9
Tan01g4377 . 23 268 MAP Kinase Kinase Kinase Kinase AT1G69220 51.8 4.3e-67 253.8
Tan11g0629 . 1 663 MAP Kinase Kinase Kinase Kinase AT5G14720 65.8 1.4e-249 859.8
Tan07g1361 . 6 622 MAP Kinase Kinase Kinase Kinase AT5G14720 55.9 3.1e-188 656.0
Tan11g0630 . 15 536 MAP Kinase Kinase Kinase Kinase AT5G14720 61.8 1.2e-174 610.9
Tan01g2286 . 7 705 MAP Kinase Kinase Kinase Kinase AT4G24100 65.9 3.2e-247 852.0
Tan01g2287 . 7 725 MAP Kinase Kinase Kinase Kinase AT4G24100 65.0 7.1e-247 850.9
Tan07g1361 . 6 354 MAP Kinase Kinase Kinase Kinase AT4G24100 64.2 9.9e-132 468.4
Tan01g2286 . 11 706 MAP Kinase Kinase Kinase Kinase AT4G10730 66.2 6.1e-248 854.4
Tan01g2287 . 11 726 MAP Kinase Kinase Kinase Kinase AT4G10730 64.7 9.8e-246 847.0
Tan07g1361 . 7 375 MAP Kinase Kinase Kinase Kinase AT4G10730 62.9 3.5e-134 476.5
Tan07g1361 . 7 351 MAP Kinase Kinase Kinase Kinase AT1G70430 69.3 9.0e-139 491.5
Tan04g2490 . 4 492 MAP Kinase Kinase Kinase Kinase AT1G70430 50.7 1.0e-129 461.5
Tan01g2286 . 5 398 MAP Kinase Kinase Kinase Kinase AT1G70430 55.2 1.4e-118 424.5
Tan01g2287 . 5 369 MAP Kinase Kinase Kinase Kinase AT1G70430 57.6 3.0e-118 423.3
Tan04g2490 . 1 680 MAP Kinase Kinase Kinase Kinase AT1G79640 59.8 5.7e-219 758.1
Tan07g1361 . 6 353 MAP Kinase Kinase Kinase Kinase AT1G79640 69.0 5.8e-147 518.8
Tan11g0629 . 1 328 MAP Kinase Kinase Kinase Kinase AT1G23700 59.8 4.5e-104 375.9
Tan07g1361 . 5 327 MAP Kinase Kinase Kinase Kinase AT1G23700 58.0 2.8e-98 356.7
Tan04g2490 . 6 324 MAP Kinase Kinase Kinase Kinase AT1G23700 51.2 6.1e-85 312.4
Tan01g2286 . 17 306 MAP Kinase Kinase Kinase Kinase AT1G23700 51.5 7.4e-75 278.9
Tan01g2287 . 17 306 MAP Kinase Kinase Kinase Kinase AT1G23700 51.5 7.4e-75 278.9
Tan11g0630 . 15 201 MAP Kinase Kinase Kinase Kinase AT1G23700 57.4 2.0e-51 201.1
Tan10g0722 . 32 507 MAP Kinase Kinase Kinase Kinase AT4G14480 57.6 3.9e-140 495.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003111 2 8 2 1 2 1 3 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 2 1 1 3 2 2 51
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68185 PF00069 Pkinase 3.80E-28 CL0016 Tan PK