Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g0653 | ATGGCTTCTTCAAGCTACTCAAACTCACCATGTGCAGCATGCAAATTCCTAAGAAGAAAATGCTTAGCAGACTGCATATTTGCTCCCTACTTTCCACCTGAAGAGCCAACCAAATTTGCCAATGTTCACAAGATCTTCGGAGCCAGCAATGTTAGCAAGCTCCTCAATGAGGTCCAGCCCCATCAGCGCGAGGACGCCGTCAATTCGCTAGCCTACGAGGCCGAGGCTCGCATGAAAGACCCCGTCTATGGCTGCGTCGGGGCCATCTCCGTTCTGCAGCGACAAGTCCTTCGATTACAGAAGGAGCTCGACGCTACAAATGCTGATTTGGTACGATATGCCAGCGGGAGCGGGCGCCCGCTCTCGCAATTTGGAAGGAGGGCAGCAGGAGCCTCGACCGCGGCTCGGCATCATTCTGATGTGTGTTTTGTTTCTCCCTTGAATAGTAATGATCATAATCATGATCCTTATTGCCATGATAAAGATCAGGAAGGGAATTGA | 501 | 50.9 | MASSSYSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVLRLQKELDATNADLVRYASGSGRPLSQFGRRAAGASTAARHHSDVCFVSPLNSNDHNHDPYCHDKDQEGN | 166 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 5740323 | 5740823 | - | Tan0010697.1 | Tan11g0653 | 767590 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g0653 | 166 | ProSiteProfiles | LOB domain profile. | 9 | 110 | IPR004883 | - | |
Tan11g0653 | 166 | Coils | Coil | 89 | 109 | - | - | |
Tan11g0653 | 166 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 8 | 115 | - | - | |
Tan11g0653 | 166 | Pfam | Lateral organ boundaries (LOB) domain | 10 | 107 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan09g2289 | Tan-Chr9:72856130 | Tan11g0653 | Tan-Chr11:5740323 | 9.20E-53 | dispersed | |
Tan10g1658 | Tan-Chr10:34729835 | Tan11g0653 | Tan-Chr11:5740323 | 5.50E-26 | dispersed | |
Tan11g0292 | Tan-Chr11:2308414 | Tan11g0653 | Tan-Chr11:5740323 | 7.40E-36 | dispersed | |
Tan11g0319 | Tan-Chr11:2505729 | Tan11g0653 | Tan-Chr11:5740323 | 3.30E-33 | dispersed | |
Tan11g0653 | Tan-Chr11:5740323 | Tan11g0811 | Tan-Chr11:6780495 | 2.10E-29 | dispersed | |
Tan11g0653 | Tan-Chr11:5740323 | Tan05g1980 | Tan-Chr5:69437201 | 1.00E-44 | wgd | |
Tan11g0653 | Tan-Chr11:5740323 | Tan07g1392 | Tan-Chr7:64748048 | 7.50E-59 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28678 | PF03195 | LOB | 9.80E-42 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g0653 | - | - | - | 0.0 |