Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0678 ATGTTCATTCTTCAGAACGACGATAAGCTTTTCAAAGTGAGTTATCCGAAGGCCATGCATGGCATTCTCGGAAGCAATTCTTTGATCATCGCCGCCGGTGACACTCATCGGAAGCTGAGAAACGTCGTCGTTAGCTTCATCACCTGGTGCAAGTCCAAACCCACTTTCCTTCTCTGTGTGGACAAGCTCTCTGTCTCTTTAATGGAGTCATGGAGATGCCAAACCCATGTGCTTTTCTGCAAAGAAGTGAAAATGTTTGCATTGAGTGTTATGGTGGAGGAGTTGTTGGGAATCGAAGCAAACGAGTCAATAGGGTCAAAAATATTGGAAGAATTTGAAACGTATATGAGAGGCTTTGTGTCTTTACCTCTCAATCTTCGGGGAACTCCATACTTTAAGGCTGTCAAGGCTAGGGAGAGACTCTCTCACATTGTGAAAGAGATGATGAGAGAGAAGAGAATGAGGGGGTTGATAGTGGGAGCGAAAATGGAAGAGGCTAATGAGAACTTTCTAGAAGTGATAATGTCAAATTGGAAGCTTGATGATGAAGAAATTGTGAGTGTTGTGTTGGACATATTGCTTGGAGGTTATGAGACAACGGCTACTCTTATGGGATTGATTGTCTATTTTCTTGCACATTCACCTCCTAATGTTCTTGCAAAATTAAAGGAAGAACATCAAGCAATAAGAATTGGTAAAAATAAGGGAGAATGTCTCAATTTGGAAGATTACAAGCAAATGGAGTTCACTTGCAATGTGATATTTGAAGCCATGAGATGTGGGAATGTGGTCAAGTTTTTACATAGGGAAGCTCTTCAAGATGTCAAATTCAAAGATATTGTCATACCTTCTCGATGGAAAGTTCATCCAGTTTTCTCAACAGTTCATCTTGATCCAACCCTTCATCCAAATCCTCATCAATTCAATCCTTGGAGATGGACGGATGACAAAGAAATGAGCAAAAAAGTGACCCCATTTGGTGGAGGGCCAAGGCTTTGTCCAGGGGTTGAAGTCGCCAAAATAGAGATTGCTTTCTTCCTCCATCATCTTGTCCTTAATTATAGGTGGAAGACAAGAGCAGATGAATGTCCACTAGCTTACCCATATGTTAAATTTAAAAGAGACTTGTTGCTTGAAATTGAGCCCATCTTGCAGCTGCAGAAATGA 1167 41.13 MFILQNDDKLFKVSYPKAMHGILGSNSLIIAAGDTHRKLRNVVVSFITWCKSKPTFLLCVDKLSVSLMESWRCQTHVLFCKEVKMFALSVMVEELLGIEANESIGSKILEEFETYMRGFVSLPLNLRGTPYFKAVKARERLSHIVKEMMREKRMRGLIVGAKMEEANENFLEVIMSNWKLDDEEIVSVVLDILLGGYETTATLMGLIVYFLAHSPPNVLAKLKEEHQAIRIGKNKGECLNLEDYKQMEFTCNVIFEAMRCGNVVKFLHREALQDVKFKDIVIPSRWKVHPVFSTVHLDPTLHPNPHQFNPWRWTDDKEMSKKVTPFGGGPRLCPGVEVAKIEIAFFLHHLVLNYRWKTRADECPLAYPYVKFKRDLLLEIEPILQLQK 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5902421 5906126 - Tan0000584.2 Tan11g0678 767615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0678 388 SUPERFAMILY Cytochrome P450 2 368 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan11g0678 388 Gene3D Cytochrome P450 1 378 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan11g0678 388 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan11g0678 388 PRINTS P450 superfamily signature 324 333 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan11g0678 388 PRINTS P450 superfamily signature 195 212 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan11g0678 388 PRINTS P450 superfamily signature 252 263 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan11g0678 388 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 326 335 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Tan11g0678 388 PRINTS E-class P450 group I signature 323 333 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan11g0678 388 PRINTS E-class P450 group I signature 184 201 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan11g0678 388 PRINTS E-class P450 group I signature 291 315 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan11g0678 388 PRINTS E-class P450 group I signature 333 356 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan11g0678 388 Pfam Cytochrome P450 27 363 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan11g0678 388 PANTHER CYTOCHROME P450 26 2 358 - GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g0678 Tan-Chr11:5902421 Tan05g1951 Tan-Chr5:68973290 1.10E-15 dispersed
Tan11g0677 Tan-Chr11:5902421 Tan11g0678 Tan-Chr11:5902421 2.20E-228 tandem
Tan11g0678 Tan-Chr11:5902421 Tan11g0679 Tan-Chr11:5904225 2.10E-141 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0678 K12639 - csv:101215045 609.757