Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0699 ATGGCGCCAACTATTTCAACAACCTTTCCGATATCATTCTCTTTGTTCCTAATAATATCGTTAGCTGTAGAAGCCAGAGAACTCACCGGAGTATACGTCGGCGGGCCCTGGCAGAGCGCCCACGCCACATTCTACGGCGGCAATGACGCCTCCGGCACTATGGGCGGGGCGTGTGGTTACGGCAACTTATACAGCCAAGGCTACGGCGTGAACACGGCGGCCCTCAGCACTGCCCTCTTCAACGACGGCTACAGCTGCGGAGCCTGTTTCGAAATCAAGTGTGTCAACGACCCACAATGGTGCCACGCCGGTAACCCCTCCATCTTCGTCACCGCCACCAACTTCTGTCCTCCCAATTACGCTCTCCCTAATGACAATGGCGGCTGGTGCAACCCTCCTCGCCCTCACTTCGACCTCTCCATGCCCATGTTCCTCAAAATCGCTCAGTATCACGCCGGGATAGTCCCCGTCTCCTTCCGCAGAGTGGCGTGCAGGAAGGAGGGAGGGATGAGGTTTACGATCAATGGGTTCAAATATTTCAATTTGGTATTGATAACCAACGTGGCAGGGGCAGGGGATATTGTGAGTGTGAGCATCAAGGGTTCGAAGACAGGGTGGACAAGTATGACACGTAATTGGGGTCAAAACTGGCAGTCAAACGCCGTTTTAGTGGGTCAGTCACTATCGTTTAGTGTTAAAGCCAGTGATGGTCAGATTTCAACCTCCTCCAATATTGTTCCTTCTGATTGGCAGTTTGGTCAAACTTTCACCGGCAACAACTTCAGATTCTAA 792 52.4 MAPTISTTFPISFSLFLIISLAVEARELTGVYVGGPWQSAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYHAGIVPVSFRRVACRKEGGMRFTINGFKYFNLVLITNVAGAGDIVSVSIKGSKTGWTSMTRNWGQNWQSNAVLVGQSLSFSVKASDGQISTSSNIVPSDWQFGQTFTGNNFRF 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6079714 6080878 + Tan0008976.1 Tan11g0699 767636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0699 263 PANTHER EXPANSIN-A15 17 261 IPR002963 GO:0009664(InterPro)
Tan11g0699 263 Gene3D - 170 261 IPR036749 -
Tan11g0699 263 SMART dpbb_1 72 159 IPR007112 -
Tan11g0699 263 FunFam Expansin 169 261 - -
Tan11g0699 263 FunFam Expansin 26 165 - -
Tan11g0699 263 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 55 169 IPR007112 -
Tan11g0699 263 CDD DPBB_EXPA_N 36 164 - -
Tan11g0699 263 PRINTS Expansin/Lol pI family signature 206 220 IPR007118 GO:0005576(InterPro)
Tan11g0699 263 PRINTS Expansin/Lol pI family signature 76 94 IPR007118 GO:0005576(InterPro)
Tan11g0699 263 PRINTS Expansin/Lol pI family signature 244 258 IPR007118 GO:0005576(InterPro)
Tan11g0699 263 PRINTS Expansin/Lol pI family signature 54 72 IPR007118 GO:0005576(InterPro)
Tan11g0699 263 PRINTS Expansin/Lol pI family signature 152 168 IPR007118 GO:0005576(InterPro)
Tan11g0699 263 PRINTS Expansin/Lol pI family signature 36 51 IPR007118 GO:0005576(InterPro)
Tan11g0699 263 SUPERFAMILY Barwin-like endoglucanases 36 187 IPR036908 -
Tan11g0699 263 PRINTS Expansin signature 180 201 IPR002963 GO:0009664(InterPro)
Tan11g0699 263 PRINTS Expansin signature 108 118 IPR002963 GO:0009664(InterPro)
Tan11g0699 263 PRINTS Expansin signature 127 144 IPR002963 GO:0009664(InterPro)
Tan11g0699 263 PRINTS Expansin signature 144 157 IPR002963 GO:0009664(InterPro)
Tan11g0699 263 PRINTS Expansin signature 215 236 IPR002963 GO:0009664(InterPro)
Tan11g0699 263 PRINTS Expansin signature 67 81 IPR002963 GO:0009664(InterPro)
Tan11g0699 263 PRINTS Expansin signature 244 260 IPR002963 GO:0009664(InterPro)
Tan11g0699 263 PRINTS Expansin signature 94 105 IPR002963 GO:0009664(InterPro)
Tan11g0699 263 PRINTS Expansin signature 168 180 IPR002963 GO:0009664(InterPro)
Tan11g0699 263 Pfam Lytic transglycolase 72 159 IPR009009 -
Tan11g0699 263 SUPERFAMILY PHL pollen allergen 166 258 IPR036749 -
Tan11g0699 263 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 179 258 IPR007117 -
Tan11g0699 263 Pfam Expansin C-terminal domain 170 247 IPR007117 -
Tan11g0699 263 Gene3D - 23 165 IPR036908 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1132 Tan-Chr3:67454049 Tan11g0699 Tan-Chr11:6079714 2.90E-74 dispersed
Tan05g0412 Tan-Chr5:2890306 Tan11g0699 Tan-Chr11:6079714 3.70E-121 dispersed
Tan07g1730 Tan-Chr7:68667309 Tan11g0699 Tan-Chr11:6079714 9.80E-74 dispersed
Tan11g0502 Tan-Chr11:4239859 Tan11g0699 Tan-Chr11:6079714 9.70E-92 dispersed
Tan11g0699 Tan-Chr11:6079714 Tan11g1444 Tan-Chr11:12979396 1.10E-69 dispersed
Tan11g0699 Tan-Chr11:6079714 Tan03g0945 Tan-Chr3:65909605 4.90E-121 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0699 - - - 0.0