Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g0734 | ATGGTTTTCTCTTCAGTTCCTGTGTTTCTTGATCCACCCAATTGGCCTTCTCAGCAACCAAATCAGCTCCAAGGAACTGCCTGTGAGACTAATAATACTCAACACCTTCCGCCACCACCACCGCCAGCTGCAGCTGGTGGTGCTGGAGGCGGAGGAGGAGGGCCTGGGTCGATTAGACCTGGATCAATGACGGATCGAGCCAGACAGGCTAAGATACCGCAACCGGAAGCCGGGTTAAAATGCCCGAGATGCGAATCAACAAACACAAAGTTTTGTTACTTCAACAACTACAGTCTCACTCAGCCACGACACTTTTGCAAGACCTGCCGACGGTACTGGACGAGAGGCGGGGCGATGAGGAACGTGCCGGTCGGGGGCGGGTGTCGGCGGTCGAGCAAGAGAAGCAGCAAAGGAGGGAGCAACCGGTCAAAATCTCCGGCGGGTTCAAGTACTTCAACAAGCACAGTGTCATCAAACAGTTGCACAACAGATATCATTAGCCACCAATTGGGTCCTCCTCCACCAACTCATTTACCCTTTTTGGCAGCTCCAAATTTACACCATCTGAGTGATTTTGGAAACATTGGTTTAAACTTTGAAGGCCTTCAAATCCCAAATTCACTCCCATCATCAGCAGGAGAATCATCCATTTTATCAAGTGGAATTATTGATCATCACCAATGGAAAATACCCTTTTTTGCAAATTTACATCAACAAAATGGGATGTATTCAAATTTCATAGCTGAAGATCATCATCATCATCATCATCAACAACAACAACCAGCTGATTTCTCAAATTACCAACGCTTGTCAAAGCCATTATTGGACAGTGGATTTAGTACTACAACTCATCAGTTGGGGAACACTAATAGTAGCATGAAAATCGTGGAGGACACACAAGGAATTAACAATTTGTCAAGAAATTTTCTGGGAATTCAACCAAATGATCAGTTCTGGAATTCAACTACAACAACAACAACAGCTGGGAATATTGCATGGACAGATCAAATTTCAGATCATTTCAATTCAACTTCTTCCACTAGCCATCTCTTGTAA | 1056 | 44.79 | MVFSSVPVFLDPPNWPSQQPNQLQGTACETNNTQHLPPPPPPAAAGGAGGGGGGPGSIRPGSMTDRARQAKIPQPEAGLKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGAMRNVPVGGGCRRSSKRSSKGGSNRSKSPAGSSTSTSTVSSNSCTTDIISHQLGPPPPTHLPFLAAPNLHHLSDFGNIGLNFEGLQIPNSLPSSAGESSILSSGIIDHHQWKIPFFANLHQQNGMYSNFIAEDHHHHHHQQQQPADFSNYQRLSKPLLDSGFSTTTHQLGNTNSSMKIVEDTQGINNLSRNFLGIQPNDQFWNSTTTTTTAGNIAWTDQISDHFNSTSSTSHLL | 351 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6262569 | 6264534 | - | Tan0005570.1 | Tan11g0734 | 767671 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g0734 | 351 | ProSitePatterns | Zinc finger Dof-type signature. | 81 | 117 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Tan11g0734 | 351 | MobiDBLite | consensus disorder prediction | 1 | 79 | - | - | |
Tan11g0734 | 351 | MobiDBLite | consensus disorder prediction | 138 | 169 | - | - | |
Tan11g0734 | 351 | Pfam | Dof domain, zinc finger | 79 | 133 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Tan11g0734 | 351 | ProSiteProfiles | Zinc finger Dof-type profile. | 79 | 133 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Tan11g0734 | 351 | MobiDBLite | consensus disorder prediction | 120 | 169 | - | - | |
Tan11g0734 | 351 | MobiDBLite | consensus disorder prediction | 11 | 33 | - | - | |
Tan11g0734 | 351 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 66 | 254 | IPR045174 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g0300 | Tan-Chr4:2442933 | Tan11g0734 | Tan-Chr11:6262569 | 2.60E-44 | dispersed | |
Tan05g0376 | Tan-Chr5:2744196 | Tan11g0734 | Tan-Chr11:6262569 | 4.40E-42 | dispersed | |
Tan08g1993 | Tan-Chr8:72042638 | Tan11g0734 | Tan-Chr11:6262569 | 1.40E-48 | dispersed | |
Tan10g1676 | Tan-Chr10:37944187 | Tan11g0734 | Tan-Chr11:6262569 | 1.50E-22 | dispersed | |
Tan11g0734 | Tan-Chr11:6262569 | Tan11g1178 | Tan-Chr11:9728980 | 2.80E-23 | dispersed | |
Tan11g0734 | Tan-Chr11:6262569 | Tan03g0966 | Tan-Chr3:66106338 | 3.80E-36 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28681 | PF02701 | zf-Dof | 4.40E-31 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g0734 | - | - | - | 0.0 |