Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0734 ATGGTTTTCTCTTCAGTTCCTGTGTTTCTTGATCCACCCAATTGGCCTTCTCAGCAACCAAATCAGCTCCAAGGAACTGCCTGTGAGACTAATAATACTCAACACCTTCCGCCACCACCACCGCCAGCTGCAGCTGGTGGTGCTGGAGGCGGAGGAGGAGGGCCTGGGTCGATTAGACCTGGATCAATGACGGATCGAGCCAGACAGGCTAAGATACCGCAACCGGAAGCCGGGTTAAAATGCCCGAGATGCGAATCAACAAACACAAAGTTTTGTTACTTCAACAACTACAGTCTCACTCAGCCACGACACTTTTGCAAGACCTGCCGACGGTACTGGACGAGAGGCGGGGCGATGAGGAACGTGCCGGTCGGGGGCGGGTGTCGGCGGTCGAGCAAGAGAAGCAGCAAAGGAGGGAGCAACCGGTCAAAATCTCCGGCGGGTTCAAGTACTTCAACAAGCACAGTGTCATCAAACAGTTGCACAACAGATATCATTAGCCACCAATTGGGTCCTCCTCCACCAACTCATTTACCCTTTTTGGCAGCTCCAAATTTACACCATCTGAGTGATTTTGGAAACATTGGTTTAAACTTTGAAGGCCTTCAAATCCCAAATTCACTCCCATCATCAGCAGGAGAATCATCCATTTTATCAAGTGGAATTATTGATCATCACCAATGGAAAATACCCTTTTTTGCAAATTTACATCAACAAAATGGGATGTATTCAAATTTCATAGCTGAAGATCATCATCATCATCATCATCAACAACAACAACCAGCTGATTTCTCAAATTACCAACGCTTGTCAAAGCCATTATTGGACAGTGGATTTAGTACTACAACTCATCAGTTGGGGAACACTAATAGTAGCATGAAAATCGTGGAGGACACACAAGGAATTAACAATTTGTCAAGAAATTTTCTGGGAATTCAACCAAATGATCAGTTCTGGAATTCAACTACAACAACAACAACAGCTGGGAATATTGCATGGACAGATCAAATTTCAGATCATTTCAATTCAACTTCTTCCACTAGCCATCTCTTGTAA 1056 44.79 MVFSSVPVFLDPPNWPSQQPNQLQGTACETNNTQHLPPPPPPAAAGGAGGGGGGPGSIRPGSMTDRARQAKIPQPEAGLKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGAMRNVPVGGGCRRSSKRSSKGGSNRSKSPAGSSTSTSTVSSNSCTTDIISHQLGPPPPTHLPFLAAPNLHHLSDFGNIGLNFEGLQIPNSLPSSAGESSILSSGIIDHHQWKIPFFANLHQQNGMYSNFIAEDHHHHHHQQQQPADFSNYQRLSKPLLDSGFSTTTHQLGNTNSSMKIVEDTQGINNLSRNFLGIQPNDQFWNSTTTTTTAGNIAWTDQISDHFNSTSSTSHLL 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6262569 6264534 - Tan0005570.1 Tan11g0734 767671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0734 351 ProSitePatterns Zinc finger Dof-type signature. 81 117 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Tan11g0734 351 MobiDBLite consensus disorder prediction 1 79 - -
Tan11g0734 351 MobiDBLite consensus disorder prediction 138 169 - -
Tan11g0734 351 Pfam Dof domain, zinc finger 79 133 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Tan11g0734 351 ProSiteProfiles Zinc finger Dof-type profile. 79 133 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Tan11g0734 351 MobiDBLite consensus disorder prediction 120 169 - -
Tan11g0734 351 MobiDBLite consensus disorder prediction 11 33 - -
Tan11g0734 351 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 66 254 IPR045174 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0300 Tan-Chr4:2442933 Tan11g0734 Tan-Chr11:6262569 2.60E-44 dispersed
Tan05g0376 Tan-Chr5:2744196 Tan11g0734 Tan-Chr11:6262569 4.40E-42 dispersed
Tan08g1993 Tan-Chr8:72042638 Tan11g0734 Tan-Chr11:6262569 1.40E-48 dispersed
Tan10g1676 Tan-Chr10:37944187 Tan11g0734 Tan-Chr11:6262569 1.50E-22 dispersed
Tan11g0734 Tan-Chr11:6262569 Tan11g1178 Tan-Chr11:9728980 2.80E-23 dispersed
Tan11g0734 Tan-Chr11:6262569 Tan03g0966 Tan-Chr3:66106338 3.80E-36 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28681 PF02701 zf-Dof 4.40E-31 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0734 - - - 0.0