Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0768 ATGCCAATTCATAAACTCACACTCGGAACGCCGAGAGAAGCGAGCCAACCGGACGCGATTAAGGCTGCATTTGCCGAATTCTTCTCCACGATCCTATTTGTTTTCGCCGGACAGGGATCCGGTTTGGCTTTCAGTAGGTTAACGGACGGTGCATCTGCAACACCGTCGGGGCTGATAGTCGCATCTCTGGCTCACGCTTTTGCGTTATTTGTGGCGGTGACTGTCGGAGCCAATATCTCCGGCGGCCATGTGAATCCGGCAGTTACATTTGGTGCACTGATTGGTGGAAACATATCGTTCTTTAGAAGTATATTGTATTGGATCGCTCAATTGCTTGGTGCCGTTGTTGCGTGCTTCCTTCTTAAGTTTGCGACCGGTGGACTGGTAACACCAGCATTTTCCCTATCATCAGGAGTTTCTGTATGGAATGCTTTTATATTTGAGGCAGTGATGACTTTTGGATTAGTGTATACAGTGTATGCAACAGCAATAGATCCAAAGAGGGAGAATTTGGGCATTATTGCACCAATTGCTATTGGTTTCATGTTTGGTGCCAACATTTTGGTTGGTGGTGCTTTTGATGGCGCTTCCATGAACCCTGCAGTCTCCTTTGGCCCTGCTGTGGTCAGCTGGTCATGGACCCATCACTGGGTCTACTGGCTTGGTCCAATGGCTGGTGCAGCCATTGCTGCCATTGTTTATGACACCATCTTTATCTGTGACTCCATGCATGATCCTCTTACTCAGTATAATGATTTTTAG 762 47.51 MPIHKLTLGTPREASQPDAIKAAFAEFFSTILFVFAGQGSGLAFSRLTDGASATPSGLIVASLAHAFALFVAVTVGANISGGHVNPAVTFGALIGGNISFFRSILYWIAQLLGAVVACFLLKFATGGLVTPAFSLSSGVSVWNAFIFEAVMTFGLVYTVYATAIDPKRENLGIIAPIAIGFMFGANILVGGAFDGASMNPAVSFGPAVVSWSWTHHWVYWLGPMAGAAIAAIVYDTIFICDSMHDPLTQYNDF 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6481157 6484239 - Tan0001254.1 Tan11g0768 767705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0768 253 CDD MIP 21 237 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan11g0768 253 Gene3D Glycerol uptake facilitator protein. 4 251 IPR023271 -
Tan11g0768 253 PANTHER AQUAPORIN-8 7 241 IPR034294 GO:0006833(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER)
Tan11g0768 253 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Tan11g0768 253 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan11g0768 253 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan11g0768 253 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan11g0768 253 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan11g0768 253 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan11g0768 253 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan11g0768 253 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan11g0768 253 SUPERFAMILY Aquaporin-like 14 242 IPR023271 -
Tan11g0768 253 FunFam Probable aquaporin TIP1-1 4 252 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g1843 Tan-Chr8:70567235 Tan11g0768 Tan-Chr11:6481157 8.10E-89 dispersed
Tan11g0768 Tan-Chr11:6481157 Tan11g0853 Tan-Chr11:7002074 7.40E-26 dispersed
Tan11g0768 Tan-Chr11:6481157 Tan03g1125 Tan-Chr3:67392328 4.00E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0768 K09873 - csv:101222909 451.055