Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0774 ATGTCTTATGCAAAATTAGCCGGGCTTCAACCAATATATGGACTTTATTCTGGTTTTCTCCCTTTGTTCGTCTATGCATTTTTTGGTTCTTCTCGTCAGCTTGCAGTTGGCCCAGTAGCATTGGTTTCTCTCCTGGTTTCTAATGTCTTGGGTGGAATTGTCAATTCATCTGAGGAACTATATACTGAACTTGCGATATTATTAGCACTCATGGTTGGAATATTGGAATGTGTGATGGGGCTCTTGAGGCTCGGATGGCTTATTCGCTTTATCAGTCACTCTGTAATCTCTGGCTTTACTACAGCTTCCGCCATTGTGATTGGATTATCCCAAGTGAAATACTTTCTGGGGTACGATGTATCCAGAAGTAGCAAAATTGTGCCTCTAATTGAGAGCATAATAGCTGGAGCAGAAGGGTTCTTATGGGCACCTTTCATAATGGGATCAGTCATCCTTGCGATACTTCAAATCATGAAACATTTGGGAAAAACAAGGAAGCACTTACGGTTTCTCAGAGTTGCTGGTCCTCTTACAGCAGTTGTTATGGGTACAACATTGGTGAAAGTATTGAATCTACCTTCCATTTCTTTGGTTGGAGACATTCCCCAAGGCCTTCCAAAGTTTTCTGTTCCTAAAAGATTCGAGCATGTGAAGTCGTTGGTTCCAACTGCCTTTCTGATCACAGGAGTAGCTATATTGGAATCTGTTGGGATTGCAAAAGCATTAGCAGCCAAGAATGGGTATGAGTTAGATTCAAATCAGGAGTTATTTGGTCTTGGAGTATCCAATGTTGTTGGCTCATTTTTTTCGGCATATCCCACAACAGGTTCTTTCTCAAGATCGGCCGTGAACCACGAAAGTGGAGCAAAAACTAGCTTATCTCAGATTGTTACAGGAATCGTTATGGGTGGTGCCCTTCTTTTCTTGACCCCATTGTTTGAGCACATACCTCAGTGCGCTTTGGCTGCCATTGTGATTTCTGCTGTAATAACTTTGGTGGATTACGATGAGGCTATTTTTTTGTGGCGTATAGATAAGAAAGATTTTCTTCTTTGGGTGATTACTGCCATTGCTACTTTGTTCCTTGGTATTGAGATTGGTGTCTTAATTGGGGTGGGTGTTTCACTGGTCTTTGTCATTCATGAATCTGCAAACCCACATATGGCTGTATTGGGGCGTCTTCCTGGCACCACTGTGTATAGAAATATTCAACAGTATCCTGAGGCATATACTTATAATGGAATTGTGATTGTTCGTATTGATGCACCAATGTATTTTGCTAACACGAGTTACATCAAAGACAGGTTACGTGATTATGAAGTTGAAGTGGATCGATCTACTGGCCGTGGGCCAGATGTTGAAAGAGTCTATTTCGTGATTATAGAGATGGCACCTGTTACGTATATAGATTCAAATGCTGTCCAGGCTCTGAAAGATTTGTATCAAGAGTACAAACTTCGTGATATTCAGATTGCCATTTCCAATCCGAATCGAGACGTTCTGCTTACATTTTCAAGATCTGGCGTCATTGAGCTTATCGGCAAGGAGTGGTTTTTTGTGAGAGTTCATGATGCAGTTCAAGTTTGTCTTCAGCATGTGGAGAGCTTAAAGGAAACAACAAAGAGATCAGATTCTTCACCAAAAGATGCATCAAGCTTTCTCCAAAGGTTAGTGAAGTCCAGAAGTGAGGATCTATCAGTGAGCCAATTAGAGTCAGGCTTCCAAAAGCTTCCAAGTTCTAATGAAATCGACACTCAATTTGAACCATTACTGTCTCGAAATCCTTGA 1788 41.22 MSYAKLAGLQPIYGLYSGFLPLFVYAFFGSSRQLAVGPVALVSLLVSNVLGGIVNSSEELYTELAILLALMVGILECVMGLLRLGWLIRFISHSVISGFTTASAIVIGLSQVKYFLGYDVSRSSKIVPLIESIIAGAEGFLWAPFIMGSVILAILQIMKHLGKTRKHLRFLRVAGPLTAVVMGTTLVKVLNLPSISLVGDIPQGLPKFSVPKRFEHVKSLVPTAFLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNVVGSFFSAYPTTGSFSRSAVNHESGAKTSLSQIVTGIVMGGALLFLTPLFEHIPQCALAAIVISAVITLVDYDEAIFLWRIDKKDFLLWVITAIATLFLGIEIGVLIGVGVSLVFVIHESANPHMAVLGRLPGTTVYRNIQQYPEAYTYNGIVIVRIDAPMYFANTSYIKDRLRDYEVEVDRSTGRGPDVERVYFVIIEMAPVTYIDSNAVQALKDLYQEYKLRDIQIAISNPNRDVLLTFSRSGVIELIGKEWFFVRVHDAVQVCLQHVESLKETTKRSDSSPKDASSFLQRLVKSRSEDLSVSQLESGFQKLPSSNEIDTQFEPLLSRNP 595
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6506607 6521719 - Tan0009950.2 Tan11g0774 767711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0774 595 ProSiteProfiles STAS domain profile. 405 529 IPR002645 -
Tan11g0774 595 Gene3D STAS domain 385 533 IPR036513 -
Tan11g0774 595 PANTHER SULFATE TRANSPORTER 1 531 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan11g0774 595 NCBIfam sulfate permease 1 525 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Tan11g0774 595 CDD STAS_SulP_like_sulfate_transporter 406 522 - -
Tan11g0774 595 FunFam Sulfate transporter 31 385 532 - -
Tan11g0774 595 Pfam Sulfate permease family 1 355 IPR011547 GO:0016020(InterPro)
Tan11g0774 595 SUPERFAMILY SpoIIaa-like 407 529 IPR036513 -
Tan11g0774 595 ProSitePatterns SLC26A transporters signature. 11 32 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Tan11g0774 595 Pfam STAS domain 406 525 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g0774 Tan-Chr11:6506607 Tan11g1359 Tan-Chr11:11899646 3.10E-99 dispersed
Tan11g0773 Tan-Chr11:6506607 Tan11g0774 Tan-Chr11:6506607 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0774 K18059 - csv:101202870 1070.46