Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan11g0812 | ATGGGGAAGAGGGGGGGCTGGTTTTCTGCTGTGAAGAAAGCATTTGCTCCTGAATCTAAGGAAAAGAAAGATCAGAAAACCAACAAACCAAAGAAAAGATGGTTTGGGAAGCCAAAGAAATTGGAGACAGTGGCATCTGCAGAGCCAGCTCCATTGGATGTCTCTGTTCTACCTATTGAAGAAGTGAAACTAGCTGATGCAGAGAATGAACAGAGCAAGCATGCTTACTCTGTTGCCATTGCCACTGCAGTGGCCGCCGAGGCGGCCGTTGCAGCGGCTCAGGCTGCGGCAGAGGTCGTTCGGCTCACCACCATCCCTCGATACTCCGGGAAATCAAAGGAAGAAATAGCAGCCATCAAGATCCAGACTGCATTCCGTGGCTATATGGCTAGGAGGGCCCTGCGGGCATTAAGAGGGTTGGTGAGGCTGAAGTCATTGATACATGGTCAATCTGTTAAAAGACAGGCAACAACCACATTAAGATGCATGCAGACACTTGCTCGAGTGCAATCACAGATTCGTGCAAGAAGAATTAGAATGTCAGAGGAGAACCAGGCTCTTCAGAGGCAGCTCCAACAAAAACATGAAAGAGAGCTTGAGAGATTAACTACTTCTGCAAACAATGAATGGGATGATAGTACTAAATCAAAGGAGCAAGTAGAAGCCAGATTAGTTAATAGGCAAGAAGCAGCAACAAGAAGAGAAAGGGCGTTGGCTTATGCTTACTCTCATCAGAATTCATGGAAGAATTCTTCAAAATCTGCAAACCCTACATTCATGGACCCGAACAATCCCCACTGGGGCTGGAGTTGGTTAGAGCGATGGATGGCCGCTCGTCCATGGGAGACCAAAAGCACCGTCGATTACCACGATCGTGGCTCTGTCAAGAGCGCAATCAGCCATGCAACCTCGATCGGAGACATTGCCAAAGCTTACGCCCGTCGCGATCTCAATCTCGACATCAAGCCTTTTCCAAGGACCCCGACAAGCCAAAAAACGAGCCGTGCACCGAGTCGCCAATCACCGGCGACTCCTACGAAGGCGCAATCGTCGCTATCTGCAGGGAGAAAATTGAAGCCGGCGAGTCCAAGAGGATTCGGCTGGGGAGGAGACGACGATTCCAGAAGCGGATTGAGCGTCAAATCGGAGCGGTACCGGCGACATAGCATCGCCGGATCATCGGTAAGGGACGACGAAAGCTTCACAAGTACGCCTTCGGTTCCAAGCTACATGGCGTCCACAGAAGCAGCTAGGGCTAGGTCCCGGCTATCGAGTCCGATTGGAACAGAGAAGACGACAGCGACTCCGGAGAAAGGACCGGCAAGTGGCGGCGCAAAGAAGCGGCTCTCGTTCCCCGCCTCGCCGGCGACAGCGAGAAGACACTCTGGTCCGCCTAAAATAGACGCTAGTCCGATCAAGAATGTTGCAGAAAGAGATTTTACCGGCGAGAGCAGATAG | 1458 | 51.37 | MGKRGGWFSAVKKAFAPESKEKKDQKTNKPKKRWFGKPKKLETVASAEPAPLDVSVLPIEEVKLADAENEQSKHAYSVAIATAVAAEAAVAAAQAAAEVVRLTTIPRYSGKSKEEIAAIKIQTAFRGYMARRALRALRGLVRLKSLIHGQSVKRQATTTLRCMQTLARVQSQIRARRIRMSEENQALQRQLQQKHERELERLTTSANNEWDDSTKSKEQVEARLVNRQEAATRRERALAYAYSHQNSWKNSSKSANPTFMDPNNPHWGWSWLERWMAARPWETKSTVDYHDRGSVKSAISHATSIGDIAKAYARRDLNLDIKPFPRTPTSQKTSRAPSRQSPATPTKAQSSLSAGRKLKPASPRGFGWGGDDDSRSGLSVKSERYRRHSIAGSSVRDDESFTSTPSVPSYMASTEAARARSRLSSPIGTEKTTATPEKGPASGGAKKRLSFPASPATARRHSGPPKIDASPIKNVAERDFTGESR | 485 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 6799965 | 6803562 | - | Tan0016753.1 | Tan11g0812 | 767749 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan11g0812 | 485 | MobiDBLite | consensus disorder prediction | 395 | 411 | - | - | |
| Tan11g0812 | 485 | Coils | Coil | 177 | 197 | - | - | |
| Tan11g0812 | 485 | Pfam | Protein of unknown function (DUF4005) | 387 | 457 | IPR025064 | - | |
| Tan11g0812 | 485 | MobiDBLite | consensus disorder prediction | 13 | 38 | - | - | |
| Tan11g0812 | 485 | MobiDBLite | consensus disorder prediction | 376 | 394 | - | - | |
| Tan11g0812 | 485 | SMART | iq_5 | 113 | 135 | IPR000048 | GO:0005515(InterPro) | |
| Tan11g0812 | 485 | ProSiteProfiles | IQ motif profile. | 114 | 142 | - | - | |
| Tan11g0812 | 485 | MobiDBLite | consensus disorder prediction | 319 | 485 | - | - | |
| Tan11g0812 | 485 | PANTHER | IQ-DOMAIN 5-RELATED | 6 | 438 | - | - | |
| Tan11g0812 | 485 | MobiDBLite | consensus disorder prediction | 324 | 356 | - | - | |
| Tan11g0812 | 485 | Pfam | IQ calmodulin-binding motif | 117 | 135 | IPR000048 | GO:0005515(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g0090 | Tan-Chr1:970592 | Tan11g0812 | Tan-Chr11:6799965 | 1.50E-21 | dispersed | |
| Tan01g4612 | Tan-Chr1:112130964 | Tan11g0812 | Tan-Chr11:6799965 | 2.50E-29 | dispersed | |
| Tan03g1041 | Tan-Chr3:66706645 | Tan11g0812 | Tan-Chr11:6799965 | 1.60E-104 | dispersed | |
| Tan04g0574 | Tan-Chr4:4837800 | Tan11g0812 | Tan-Chr11:6799965 | 4.40E-101 | dispersed | |
| Tan04g0575 | Tan-Chr4:4837800 | Tan11g0812 | Tan-Chr11:6799965 | 8.20E-113 | dispersed | |
| Tan07g0486 | Tan-Chr7:8655859 | Tan11g0812 | Tan-Chr11:6799965 | 3.20E-17 | dispersed | |
| Tan08g1905 | Tan-Chr8:71408315 | Tan11g0812 | Tan-Chr11:6799965 | 4.70E-73 | dispersed | |
| Tan09g0678 | Tan-Chr9:55436653 | Tan11g0812 | Tan-Chr11:6799965 | 6.40E-33 | dispersed | |
| Tan10g0024 | Tan-Chr10:570467 | Tan11g0812 | Tan-Chr11:6799965 | 2.60E-38 | dispersed | |
| Tan10g0025 | Tan-Chr10:570467 | Tan11g0812 | Tan-Chr11:6799965 | 4.00E-35 | dispersed | |
| Tan10g0796 | Tan-Chr10:6628723 | Tan11g0812 | Tan-Chr11:6799965 | 1.00E-14 | dispersed | |
| Tan10g1434 | Tan-Chr10:19448017 | Tan11g0812 | Tan-Chr11:6799965 | 2.80E-22 | dispersed | |
| Tan10g1435 | Tan-Chr10:19448017 | Tan11g0812 | Tan-Chr11:6799965 | 2.80E-22 | dispersed | |
| Tan11g0812 | Tan-Chr11:6799965 | Tan11g1579 | Tan-Chr11:14727614 | 7.60E-27 | dispersed | |
| Tan02g0410 | Tan-Chr2:3532916 | Tan11g0812 | Tan-Chr11:6799965 | 8.20E-17 | transposed | |
| Tan03g2549 | Tan-Chr3:78698596 | Tan11g0812 | Tan-Chr11:6799965 | 2.00E-33 | transposed | |
| Tan06g1528 | Tan-Chr6:22056702 | Tan11g0812 | Tan-Chr11:6799965 | 5.80E-25 | transposed | |
| Tan10g1631 | Tan-Chr10:30711236 | Tan11g0812 | Tan-Chr11:6799965 | 2.90E-20 | transposed | |
| Tan11g0812 | Tan-Chr11:6799965 | Tan04g0573 | Tan-Chr4:4837800 | 3.30E-115 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan11g0812 | - | - | - | 0.0 |