Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0841 ATGAAGCGTTGCCGAAGCAAAGAAGAAAGACACGAAGAAGAAGGCACGCAAGGGTCAAAGAAGAAAGCTAGGGCAGAGAAGAAAGCCATTAGCGATAATGAACATATAAAAACAGCTAAAGAAGTGTTGCACGTATCAACAACCCCAACTACAATTATGTGCCGCGAGGACGAACAAAGTAGAATCCTCAATTTTTGCAAGTCTCATGTGGAGCAAGAGAAAGCTGGTAGTTTGTATGTTTGCGGATGTCCAGGAACTGGCAAATCTCTGTCCATGGAGAAAGTGAAAAAGCAGTTAGCTGCTTGGGTGAAAGATTCAGATCTTCAGCTGCCAGATATTTTGTCCATAAATTGCACCTCGTTAGCAAATACAGCCGATATTTTCGTTAAGATGATGGGTGAAGGCCAACCTCAAAGGAAAAGAAATGGCTCTTTAACACCCTTGCAACATCTTCAACGCTTATACTCCCAAAAGGCAGAGACATCTTGCATGAAGATGATGTTGATAATAGCTGATGAATTGGATTATTTAATTACAAAGGATAAAGTAGTGCTTCATGATCTGTTCATGCTCACAACTTTTCCATTTTCAAGATGTATTTTGATAGGAATTGCAAATGCTATTGACTTAGCAGATCGCTTTCTTCCAGGACTTCAAGCATTGAATTGCAAACCTCAGGTCATAACTTATAAGGCTTATTCCAAGGATCAGATCCTCAAGATTCTTCAACAAAGGTTAATTGTGCTTCCTTTCGTTGTCTTTCAACCGCAAGCTCTGGAGCTCTGTGCTAGAAAAGTTGCAGCTGTGTCTGGAGATATGAGAAAAGCTCTTTGCATTTGCAGAAATGCCATTGAGTTGTTAGAGGTGGAACTCAAAGCATCCTCTGAGGAGCTGAACCGTAATGATGGATGTAACGCTTCGACACCTGAGTTTGTCAAAAGACAAGAGACTCAAATTGTGAGGTTAGACCATATGGCTGTTGCCTTATCCAAGACTTTTAAATCACCAGCAGTAGAAACCATACAATCTCTTCCTCAGCATCAACAGATTATTTTATGCTCCGTTGTAAAACTCGTTCGTCAAGGGAAGAAGGATACAACCATAGGAGAGCTAAACAAATCATACATAGATATCTGCAAATCGACACTAATCCCACCGGTGGGAACTTTGGAACTTTCAACTATGTTCACAGTGCTAAACGACCAGGTAGTAACCAAACAAAGAATTTGA 1230 40.57 MKRCRSKEERHEEEGTQGSKKKARAEKKAISDNEHIKTAKEVLHVSTTPTTIMCREDEQSRILNFCKSHVEQEKAGSLYVCGCPGTGKSLSMEKVKKQLAAWVKDSDLQLPDILSINCTSLANTADIFVKMMGEGQPQRKRNGSLTPLQHLQRLYSQKAETSCMKMMLIIADELDYLITKDKVVLHDLFMLTTFPFSRCILIGIANAIDLADRFLPGLQALNCKPQVITYKAYSKDQILKILQQRLIVLPFVVFQPQALELCARKVAAVSGDMRKALCICRNAIELLEVELKASSEELNRNDGCNASTPEFVKRQETQIVRLDHMAVALSKTFKSPAVETIQSLPQHQQIILCSVVKLVRQGKKDTTIGELNKSYIDICKSTLIPPVGTLELSTMFTVLNDQVVTKQRI 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6910401 6916120 - Tan0007001.6 Tan11g0841 767778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0841 409 Gene3D - 226 321 - -
Tan11g0841 409 FunFam Cell division control protein 222 341 - -
Tan11g0841 409 CDD AAA 58 214 - -
Tan11g0841 409 FunFam Cell division control protein 33 221 - -
Tan11g0841 409 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 290 IPR027417 -
Tan11g0841 409 Gene3D - 337 409 IPR036388 -
Tan11g0841 409 Pfam Cdc6/ORC-like, ATPase lid domain 233 290 IPR054425 -
Tan11g0841 409 Pfam AAA domain 74 194 IPR049945 GO:0016887(InterPro)
Tan11g0841 409 PIRSF Cdc6 2 408 IPR016314 GO:0006270(InterPro)|GO:0051301(InterPro)
Tan11g0841 409 Gene3D - 31 225 IPR027417 -
Tan11g0841 409 Pfam CDC6, C terminal winged helix domain 339 404 IPR015163 -
Tan11g0841 409 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 8 404 IPR050311 GO:0003688(PANTHER)|GO:0005634(PANTHER)|GO:0033314(PANTHER)
Tan11g0841 409 SUPERFAMILY Winged helix DNA-binding domain 338 401 IPR036390 -
Tan11g0841 409 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0461 Tan-Chr5:3185471 Tan11g0841 Tan-Chr11:6910401 3.20E-208 dispersed
Tan11g0841 Tan-Chr11:6910401 Tan11g0843 Tan-Chr11:6910401 7.30E-225 dispersed
Tan11g0840 Tan-Chr11:6910401 Tan11g0841 Tan-Chr11:6910401 2.10E-225 tandem
Tan11g0841 Tan-Chr11:6910401 Tan11g0842 Tan-Chr11:6910401 1.20E-206 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0841 K02213 - csv:101205741 637.876