Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0842 ATGAAGCGTTGCCGAAGCAAAGAAGAAAGACACGAAGAAGAAGGCACGCAAGGGTCAAAGAAGAAAGCTAGGGCAGAGAAGAAAGCCATTAGCGATAATGAACATATAAAAACAGCTAAAGAAGTGTTGCACGTATCAACAACCCCAACTACAATTATGTGCCGCGAGGACGAACAAAGTAGAATCCTCAATTTTTGCAAGTCTCATGTGGAGCAAGAGAAAGCTGGTAGTTTGTATGTTTGCGGATGTCCAGGAACTGGCAAATCTCTGTCCATGGAGAAAGTGAAAAAGCAGTTAGCTGCTTGGGTGAAAGATTCAGATCTTCAGCTGCCAGATATTTTGTCCATAAATTGCACCTCGTTAGCAAATACAGCCGATATTTTCGTTAAGATGATGGGTGAAGGCCAACCTCAAAGGAAAAGAAATGGCTCTTTAACACCCTTGCAACATCTTCAACGCTTATACTCCCAAAAGGCAGAGACATCTTGCATGAAGATGATGTTGATAATAGCTGATGAATTGGATTATTTAATTACAAAGGATAAAGTAGTGCTTCATGATCTGTTCATGCTCACAACTTTTCCATTTTCAAGATGTATTTTGATAGGAATTGCAAATGCTATTGACTTAGCAGATCGCTTTCTTCCAGGACTTCAAGCATTGAATTGCAAACCTCAGGTCATAACTTATAAGGCTTATTCCAAGGATCAGATCCTCAAGATTCTTCAACAAAGGTTAATTGTGCTTCCTTTCGTTGTCTTTCAACCGCAAGCTCTGGAGCTCTGTGCTAGAAAAGTTGCAGCTGTGTCTGGAGATATGAGAAAAGCTCTTTGCATTTGCAGAAATGCCATTGAGTTGTTAGAGGTGGAACTCAAAGCATCCTCTGAGGAGCTGAACCGTAATGATGGATGTAACGCTTCGACACCTGAGTTTGTCAAAAGACAAGAGACTCAAATTGTGAGGTTAGACCATATGGCTGTTGCCTTATCCAAGACTTTTAAATCACCAGCAGTAGAAACCATACAATCTCTTCCTCAGCATCAACAGATTATTTTATGCTCCGTTGTAAAACTCGTTCGTCAAGGGAAGAAGGATACAACCATAGGAGAGGTGGGTGCTCAATTCCTGAGTTAA 1134 40.92 MKRCRSKEERHEEEGTQGSKKKARAEKKAISDNEHIKTAKEVLHVSTTPTTIMCREDEQSRILNFCKSHVEQEKAGSLYVCGCPGTGKSLSMEKVKKQLAAWVKDSDLQLPDILSINCTSLANTADIFVKMMGEGQPQRKRNGSLTPLQHLQRLYSQKAETSCMKMMLIIADELDYLITKDKVVLHDLFMLTTFPFSRCILIGIANAIDLADRFLPGLQALNCKPQVITYKAYSKDQILKILQQRLIVLPFVVFQPQALELCARKVAAVSGDMRKALCICRNAIELLEVELKASSEELNRNDGCNASTPEFVKRQETQIVRLDHMAVALSKTFKSPAVETIQSLPQHQQIILCSVVKLVRQGKKDTTIGEVGAQFLS 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6910401 6916120 - Tan0007001.7 Tan11g0842 767779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0842 377 FunFam Cell division control protein 222 341 - -
Tan11g0842 377 Pfam CDC6, C terminal winged helix domain 339 374 IPR015163 -
Tan11g0842 377 CDD AAA 58 214 - -
Tan11g0842 377 PIRSF Cdc6 2 376 IPR016314 GO:0006270(InterPro)|GO:0051301(InterPro)
Tan11g0842 377 Gene3D - 31 225 IPR027417 -
Tan11g0842 377 Pfam Cdc6/ORC-like, ATPase lid domain 233 290 IPR054425 -
Tan11g0842 377 Gene3D - 226 321 - -
Tan11g0842 377 Pfam AAA domain 74 194 IPR049945 GO:0016887(InterPro)
Tan11g0842 377 FunFam Cell division control protein 33 221 - -
Tan11g0842 377 MobiDBLite consensus disorder prediction 1 30 - -
Tan11g0842 377 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 8 374 IPR050311 GO:0003688(PANTHER)|GO:0005634(PANTHER)|GO:0033314(PANTHER)
Tan11g0842 377 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 290 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan11g0841 Tan-Chr11:6910401 Tan11g0842 Tan-Chr11:6910401 1.20E-206 tandem
Tan11g0842 Tan-Chr11:6910401 Tan11g0843 Tan-Chr11:6910401 2.40E-206 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0842 K02213 - csv:101205741 580.867