Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0846 ATGGCTTCCAACACCTTGATGAGCTGCGGCATTGCCACAACCGCCTTCCCCTCCGTCCTTTCCTCCTCCAAGTCTAAATTCGCCGCCGCTGTCCCAATTTCCGGCGTCGCCGTCAATGCTTCCTCGCGCTTTTCCATGTCCGCCGAGTGGATGCCCGGCCAGCCCCGCCCGCCGTACCTCGACGGCTCTGCCCCCGGTGATTTTGGCTTTGACCCTCTTCGGTTGGGAGAAGTGCCAGAGAATCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGAATTTTGGTACCTGAAGCTTTGGGATTGGGCAACTGGGTAAAAGCTCAGGAATGGGCAGCCATTCCAGGAGGCCAAGCTACCTACTTGGGACAACCAGTTCCATGGGGAACTTTGCCAACCATTTTGGTCATTGAATTCCTTGCCATTGCCTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCTGAGAAGAAGAAGTACCCTGGAGGTGCTTTCGATCCATTGGGCTACTCAAAAGACCCAGAAAAGTTGAAGGAATACAAAGTCAAAGAGATCAAAAATGGTCGGTTGGCATTGTTGGCTTTTGTTGGATTCTGTGTGCAACAATCGGCATACCCAGGAACAGGGCCATTGGAGAACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATCATCATCCCCAGATCGGTTTCGCCTTGA 741 52.9 MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSVSP 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6949329 6951150 + Tan0015005.1 Tan11g0846 767783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0846 246 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 12 235 IPR001344 GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Tan11g0846 246 FunFam Chlorophyll a-b binding protein, chloroplastic 51 237 - -
Tan11g0846 246 SUPERFAMILY Chlorophyll a-b binding protein 40 240 - -
Tan11g0846 246 Pfam Chlorophyll A-B binding protein 57 211 IPR022796 -
Tan11g0846 246 Gene3D Chlorophyll a/b binding protein domain 51 237 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0807 Tan-Chr3:64177100 Tan11g0846 Tan-Chr11:6949329 1.00E-39 dispersed
Tan09g1055 Tan-Chr9:62798005 Tan11g0846 Tan-Chr11:6949329 6.10E-39 dispersed
Tan11g0846 Tan-Chr11:6949329 Tan05g0624 Tan-Chr5:4631506 3.30E-31 dispersed
Tan11g0846 Tan-Chr11:6949329 Tan09g2110 Tan-Chr9:71467726 2.60E-39 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0846 K08907 - csv:101211428 499.204