Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g0846 | ATGGCTTCCAACACCTTGATGAGCTGCGGCATTGCCACAACCGCCTTCCCCTCCGTCCTTTCCTCCTCCAAGTCTAAATTCGCCGCCGCTGTCCCAATTTCCGGCGTCGCCGTCAATGCTTCCTCGCGCTTTTCCATGTCCGCCGAGTGGATGCCCGGCCAGCCCCGCCCGCCGTACCTCGACGGCTCTGCCCCCGGTGATTTTGGCTTTGACCCTCTTCGGTTGGGAGAAGTGCCAGAGAATCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGAATTTTGGTACCTGAAGCTTTGGGATTGGGCAACTGGGTAAAAGCTCAGGAATGGGCAGCCATTCCAGGAGGCCAAGCTACCTACTTGGGACAACCAGTTCCATGGGGAACTTTGCCAACCATTTTGGTCATTGAATTCCTTGCCATTGCCTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCTGAGAAGAAGAAGTACCCTGGAGGTGCTTTCGATCCATTGGGCTACTCAAAAGACCCAGAAAAGTTGAAGGAATACAAAGTCAAAGAGATCAAAAATGGTCGGTTGGCATTGTTGGCTTTTGTTGGATTCTGTGTGCAACAATCGGCATACCCAGGAACAGGGCCATTGGAGAACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATCATCATCCCCAGATCGGTTTCGCCTTGA | 741 | 52.9 | MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSVSP | 246 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6949329 | 6951150 | + | Tan0015005.1 | Tan11g0846 | 767783 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g0846 | 246 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 12 | 235 | IPR001344 | GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro) | |
Tan11g0846 | 246 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 51 | 237 | - | - | |
Tan11g0846 | 246 | SUPERFAMILY | Chlorophyll a-b binding protein | 40 | 240 | - | - | |
Tan11g0846 | 246 | Pfam | Chlorophyll A-B binding protein | 57 | 211 | IPR022796 | - | |
Tan11g0846 | 246 | Gene3D | Chlorophyll a/b binding protein domain | 51 | 237 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g0807 | Tan-Chr3:64177100 | Tan11g0846 | Tan-Chr11:6949329 | 1.00E-39 | dispersed | |
Tan09g1055 | Tan-Chr9:62798005 | Tan11g0846 | Tan-Chr11:6949329 | 6.10E-39 | dispersed | |
Tan11g0846 | Tan-Chr11:6949329 | Tan05g0624 | Tan-Chr5:4631506 | 3.30E-31 | dispersed | |
Tan11g0846 | Tan-Chr11:6949329 | Tan09g2110 | Tan-Chr9:71467726 | 2.60E-39 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g0846 | K08907 | - | csv:101211428 | 499.204 |