Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g0853 | ATGACGAAGAATGCGGCGGAGCGCGGCTCGTTCTCGACGAAGGACTACCACGATCCGCCACCGGCGCCGCTCATCGACGCCGTGGAGATTACGAAGTGGTCGTTTTACAGAGCTCTGATTGCGGAGTTCATAGCCACTCTGCTTTTCCTGTACGTCACTGTGTTGACGGTGATCGGCTACAAATCGCAGACGGATCATATCGGCAACAAGAATGTCGATCCTTGTGGTGGCGTTGGGATTCTCGGCATTGCATGGGCGTTTGGAGGAATGATCTTCGTTCTTGTTTACTGTACTGCTGGAATTTCAGGGGGCCACATAAACCCAGCAGTGACATTTGGGCTGCTTTTGGCCCGTAAGGTGTCACTGGTACGGGCCGTGATGTACATGGTGGCCCAATGCTTAGGGGCCATTAGCGGAGTTGGGCTCGTGAAGGCCTTCCAGAAGGCCCACTTCCAGAAATACGGCGGTGGGGCCAATGGGCTCGCCGACGGCTACACCGTCGGCGTCGGACTGGCGGCGGAGATCGTGGGAACGTTTGTGTTGGTGTACACAGTCTTCTCTGCAACTGATCCCAAACGAAACGCCAGAGATTCCCATGTTCCTGTTTTGGCTCCACTTCCAATTGGATTTGCAGTGTTCATGGTTCACTTGGCTACTATTCCAATCACTGGCACTGGAATCAACCCAGCAAGAAGCTTGGGATCTGCTGCTATTTTCAATGAGCAAAAGACTTGGAATAACCATTGGATATTTTGGGTTGGACCCTTCATAGGAGCTGCAATTGCAGCATTCTACCACCAATTCATCTTGAGAGCAGGTGCTGTTAAAGCTCTTGGGTCATTTAGAAGCAACCCAAATGTGTGA | 864 | 52.08 | MTKNAAERGSFSTKDYHDPPPAPLIDAVEITKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDHIGNKNVDPCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLLLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKAHFQKYGGGANGLADGYTVGVGLAAEIVGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGSAAIFNEQKTWNNHWIFWVGPFIGAAIAAFYHQFILRAGAVKALGSFRSNPNV | 287 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7002074 | 7007295 | - | Tan0017407.1 | Tan11g0853 | 767790 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g0853 | 287 | FunFam | Probable aquaporin PIP1-2 | 22 | 285 | - | - | |
Tan11g0853 | 287 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 7 | 283 | IPR034294 | GO:0005886(PANTHER)|GO:0015250(PANTHER) | |
Tan11g0853 | 287 | Pfam | Major intrinsic protein | 29 | 266 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan11g0853 | 287 | Gene3D | Glycerol uptake facilitator protein. | 22 | 287 | IPR023271 | - | |
Tan11g0853 | 287 | PRINTS | Major intrinsic protein family signature | 87 | 111 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan11g0853 | 287 | PRINTS | Major intrinsic protein family signature | 209 | 231 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan11g0853 | 287 | PRINTS | Major intrinsic protein family signature | 124 | 143 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan11g0853 | 287 | PRINTS | Major intrinsic protein family signature | 173 | 191 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan11g0853 | 287 | PRINTS | Major intrinsic protein family signature | 37 | 56 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan11g0853 | 287 | PRINTS | Major intrinsic protein family signature | 249 | 269 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan11g0853 | 287 | NCBIfam | MIP family channel protein | 41 | 266 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan11g0853 | 287 | SUPERFAMILY | Aquaporin-like | 29 | 271 | IPR023271 | - | |
Tan11g0853 | 287 | ProSitePatterns | MIP family signature. | 105 | 113 | IPR022357 | - | |
Tan11g0853 | 287 | CDD | MIP | 37 | 269 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g1062 | Tan-Chr3:66863529 | Tan11g0853 | Tan-Chr11:7002074 | 4.00E-129 | dispersed | |
Tan03g1063 | Tan-Chr3:66869326 | Tan11g0853 | Tan-Chr11:7002074 | 1.10E-120 | dispersed | |
Tan04g0597 | Tan-Chr4:5061882 | Tan11g0853 | Tan-Chr11:7002074 | 4.50E-108 | dispersed | |
Tan05g0256 | Tan-Chr5:1952043 | Tan11g0853 | Tan-Chr11:7002074 | 1.40E-121 | dispersed | |
Tan05g1123 | Tan-Chr5:10082063 | Tan11g0853 | Tan-Chr11:7002074 | 1.50E-108 | dispersed | |
Tan07g1628 | Tan-Chr7:67736079 | Tan11g0853 | Tan-Chr11:7002074 | 2.60E-104 | dispersed | |
Tan08g1884 | Tan-Chr8:71178168 | Tan11g0853 | Tan-Chr11:7002074 | 4.70E-117 | dispersed | |
Tan11g0768 | Tan-Chr11:6481157 | Tan11g0853 | Tan-Chr11:7002074 | 7.40E-26 | dispersed | |
Tan01g4556 | Tan-Chr1:111392020 | Tan11g0853 | Tan-Chr11:7002074 | 2.00E-30 | transposed | |
Tan08g1534 | Tan-Chr8:63537060 | Tan11g0853 | Tan-Chr11:7002074 | 1.20E-30 | transposed | |
Tan11g0853 | Tan-Chr11:7002074 | Tan03g1055 | Tan-Chr3:66822569 | 9.10E-113 | wgd | |
Tan11g0853 | Tan-Chr11:7002074 | Tan04g0596 | Tan-Chr4:5061882 | 4.10E-129 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g0853 | K09872 | - | csv:101205700 | 497.664 |