Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan11g0864 ATGAATAGAGGAATGGATTCACTGATAGAACCAATGAGGAACCATGAGAAGTATTTAGATTCTCAGTTATGGCATGCCTGTGCTGGTGGGATGGTTCAAATGCCTTCTATTAACTCAAAGGTAGTCTACTTCCCCCAGGGTCATGCCGAGCATGCCCAGGGGAATGTTGATTTTGGGAATGCTCGGATTCCTTCCCTCGTTCCTTGCAGGGTGTCTGCCATTAAATATATGGCAGATCCTGAAACGGATGAGGTTTTTGCTAAGATAAGGTTGGTTCCACTGAGGAACAATGAATTCAATTTGGATGATGATGATGACCTTCTTGGCCACAATGAAATTAGGAATCAGGAGAAACCATCCTCCTTTGCCAAGACATTGACACAATCTGATGCAAACAATGGCGGAGGATTCTCTGTGCCTCGCTATTGTGCTGAGACGATCTTTCCTCGATTGGACTACTCAGCAGAACCTCCTGTTCAAACCATTCTTGCCAAGGATGTTCATGGCGAGATTTGGAAGTTTAGGCATATATACAGAGGGACTCCCCGTCGCCATCTTTTGACAACTGGGTGGAGTAATTTTGTGAATCAGAAGAAACTTGTTGCTGGGGACTCAATTGTTTTCCTGAGGGCAGAAACTGGTGATCTTTGTGTAGGAGTTAGGCGAGCCAAGAGGGGAATTGGTTGTGGAATTGATTACTCACCTGGGTGGAACCCAGCAAGTTCAGGCTCTCCACTTGTGGGGTATTCTGATTTCATGAGGGAGAATGATGGTAGATTGGTAAGAAGAAATTCAAATGGGAATCTGAATGGGAGAGTGAAGGTCGAATCTGTCATTGAAGCTGCAATGCTTGCTGCCAGTGGCAAGCCCTTTGAGATTGTGTACTACCCATGTGCTGGCACTCCAGAGTTTGTTGTTAGGGCCTCTACTGTAAGATCTGCAATGCAAATTCATTGGTATTCTGCTATGAGATTCAAGATGCCTTTTGAAACTGAGGATTCATCTCGGATAAGCTGGTTTATGGGAACTATATCTTCCATCCAGGTAGCTGATCCTATTCGGTGGCCTGATTCTCCCTGGCGAATGTTGCAGGTGACATGGGATGAACCAGATTTACTGCAAAATGTGAAGAGTGTCAACCCATGGTTGGTTGAAGTGGTAGTAAACATGCCAGCTATCCATGTCTCCCCCTTCTCGCCACCGAGAAAGAAGCCACGTTTTCCGCTTCCAGCAGAAACTCCTGTATTTGGTCACCTTCCAATGCCATCGTTTTCCACCCATTTCTTTGATGCAACCAACCCGTTTCAAAGCATTACAGCTAACAACATTCCTGCAGGCATACAGGGAGCCAGGCATACTCAATTTGGACTCTCTTCATCCAACCTCCAAATCGGCAAAACGCCTTCGGGACAATTTCCCGCTGGTCTTAAGCACCTTGATGGTGCCACTCCTCCTCCTGGCATCCGTGGCGAGGATATTTTCGGAGGCACGAAAAACCCTGATAAACTTTCTCATTGGCTAACAGTGGGAAATCACATCCAAAGCTCAAAAGAAAGCAAAGAAACAAAACCAGGTCATATCATATTGTTTGGCCAACTCATTCTTCCTAATCAACAGATTTCTAACAGCTTCTCTGGAGATACGACGAACGCATCCGATCCAAATCTAGAGAAAGCACCAAATCTTTCAGACGGTTCTGGCTTGTCATCACAGCAGAATGGTTCACTGGAGAATTCATCAGATGGAGGATCTACCTCATACAACGGTCCAGACAAAACTGGTCTTAGCTCGGACACTTTTCATTGCAAGGTGTCTACGGAGTTGGAGAATGTCAGTCGTACTCTTGATCTATCAGTCCTCAGATCGTACGAAGAATTGTATAGAAAGCTAGGCAATATGTTTGGTGTAGGAAGCTCAGAGATGCTGAATTCTGTTCTTTATCAGGATGCTCTTGGTGCTACAAAGCATGCTGGAGAGGAGCCTTTCAGCGAGTTTATGAAGACAGCAAGAAGACTAACTGTACTCACAGATTCTCGAAGTAGGGACAAACATTAG 2055 45.26 MNRGMDSLIEPMRNHEKYLDSQLWHACAGGMVQMPSINSKVVYFPQGHAEHAQGNVDFGNARIPSLVPCRVSAIKYMADPETDEVFAKIRLVPLRNNEFNLDDDDDLLGHNEIRNQEKPSSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEIWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAETGDLCVGVRRAKRGIGCGIDYSPGWNPASSGSPLVGYSDFMRENDGRLVRRNSNGNLNGRVKVESVIEAAMLAASGKPFEIVYYPCAGTPEFVVRASTVRSAMQIHWYSAMRFKMPFETEDSSRISWFMGTISSIQVADPIRWPDSPWRMLQVTWDEPDLLQNVKSVNPWLVEVVVNMPAIHVSPFSPPRKKPRFPLPAETPVFGHLPMPSFSTHFFDATNPFQSITANNIPAGIQGARHTQFGLSSSNLQIGKTPSGQFPAGLKHLDGATPPPGIRGEDIFGGTKNPDKLSHWLTVGNHIQSSKESKETKPGHIILFGQLILPNQQISNSFSGDTTNASDPNLEKAPNLSDGSGLSSQQNGSLENSSDGGSTSYNGPDKTGLSSDTFHCKVSTELENVSRTLDLSVLRSYEELYRKLGNMFGVGSSEMLNSVLYQDALGATKHAGEEPFSEFMKTARRLTVLTDSRSRDKH 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7043824 7047412 - Tan0001676.1 Tan11g0864 767801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan11g0864 684 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 19 679 IPR044835 GO:0003677(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro)
Tan11g0864 684 SUPERFAMILY DNA-binding pseudobarrel domain 107 224 IPR015300 -
Tan11g0864 684 Gene3D - 596 682 - -
Tan11g0864 684 CDD B3_DNA 121 222 IPR003340 GO:0003677(InterPro)
Tan11g0864 684 Gene3D - 120 224 IPR015300 -
Tan11g0864 684 Gene3D - 320 391 - -
Tan11g0864 684 SMART B3_2 122 224 IPR003340 GO:0003677(InterPro)
Tan11g0864 684 ProSiteProfiles B3 DNA-binding domain profile. 122 224 IPR003340 GO:0003677(InterPro)
Tan11g0864 684 ProSiteProfiles PB1 domain profile. 599 679 IPR053793 -
Tan11g0864 684 Pfam Auxin response factor 281 364 IPR010525 GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro)
Tan11g0864 684 FunFam Auxin response factor 120 224 - -
Tan11g0864 684 FunFam Auxin response factor 319 392 - -
Tan11g0864 684 MobiDBLite consensus disorder prediction 541 592 - -
Tan11g0864 684 Pfam B3 DNA binding domain 122 223 IPR003340 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0245 Tan-Chr5:1873929 Tan11g0864 Tan-Chr11:7043824 6.40E-224 dispersed
Tan05g0246 Tan-Chr5:1873929 Tan11g0864 Tan-Chr11:7043824 1.50E-217 dispersed
Tan11g0864 Tan-Chr11:7043824 Tan11g2197 Tan-Chr11:59274760 2.80E-59 dispersed
Tan11g0864 Tan-Chr11:7043824 Tan03g1067 Tan-Chr3:66922724 4.00E-223 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28688 PF02362 B3 4.60E-21 CL0405 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan11g0864 K14486 - csv:101204568 1147.11