Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g0873 | ATGGGATCCGACAAGGAAAATGGCAGCGTTGGAAGGGCGGAGCCGGGCGCCTTTTGCGGCGGCGTGGCGACGTATTGGAACGGCGCGGCGGAGGGGCTGAAGGGGAGCCATTGGGAAGAGTTCAAACGCATGGTGGAGGAATTTCGACGGCCGGTGGTCCGACTCGGCGGCGAGAGCCTGACGATAGCGCAAGTGGCTGGCATTGCGGCGGCGCGTGGAAGTGAAGTTGCAGTGGAGCTCTGTGAGACGGCTCGGCCGGCGGTGGAGGCGAGTAGTAAATGGGTTGTGGAGAGCATGAGTAATGGAACTGATAGTTATGGAATTACGACTGGCTTTGGTTCCACCTCGCATCGGAGGACCGATCAAGGTGAAGACCTTCAAAAAGAACTCATTAGATTCTTAAACGCAGGAATTTTTGGGAAAGATTCAAATTCTTGCCACACATTACCACAACCCGCGACAAGAGCCGCCATGGTTGTGAGGATCAACACACTTTTGCAAGGCTATTCTGGCATTAGGTTTGAAATTTTGGAAGCCATAGCCAAATTCCTCAACCACAACATTACCCCATGTCTCCCTCTTAGAGGAACCATCACAGCTTCTGGTGACCTAGTTCCACTTTCATATATTGTTGGGCTTTTGACTGGCAGGCCCAACTCCAAGGCCATTGGGCCCAATGGTGAATCTCTTAGCCCAATTCAAGCCTTTCATCTTGCTGGGATTAGTGGTGGTTTCTTCCATTTGAAACCTAAGGAAGGTCTTGCACTTGTCAATGGCACTGCAGTTGGTTCTGGCTTGGCTTCCATTGTTCTTTTTGAGGCCAATTATCTTGCTATCCTCTCTGAGATCCTATCAGCAGTTTTTGTTGAAGTTATGCAAGGAAAGCCTGAATTTACAGACCATTTGACTCATAAGTTGAAGCACCATCCTGGTCAGATTGAAGCAGCTGCAATTATGGAGCATATATTAGATGGAAGTTCCTATGTTAAAACTGCTAGAAAATTGCATGAAATTGACCCACTTCATAAGCCTAAACAAGATCGATATGCTCTTAGAACCTCCCCCCAATGGCTTGGCCCTCAAATTGAAGTCATTCGACACTCCACCAAGATGATTGAGCGTGAGATTAACTCTGTCAATGATAACCCATTGATTGATGTGTTGAGAAACAAGGCTTTACATGGAGGGAACTTCCAAGGTACTCCCATTGGTGTCTCAATGGATAATACTCGTTTAGCAATTGCTTCTATTGGCAAACTCATGTTTGCACAGTTCTCAGAGCTTGTCAATGACTTTTACAACAATGGATTGCCTTCAAATCTCTTTGCTAGTAGAAATCCAAGCTTGGATTATGGGTTCAAAGGTGCAGAGATTGCGATGGCTTCGTATTGCTCTGAGCTTCAATACTTGGCAAACCCAGTAACCAATCATGTTCAAAGCGCTGAGCAACACAACCAAGACGTCAACTCATTGGGGTTGATATCGTCGAGAAAAACAGCTGAGGCGGTTGAGATATTGAAACTTATGTCCACTACTTACTTGGTGGCATTGTGCCAAGCTATTGATTTAAGACACATGGAGAAGAATTTGAAGAAAACAGTGAAGAACACTGTCAGCCAAGTGGCAAAGAAGATCCTTGTGTTGCACTTTAATGGCAATCTCCATCCAATTAGATATAGTGAAAAGGACTTGCTTCAAGCTGTGGATCGAGAACAAGTTTTTGCCTACATTGACGATCCTTGCAGTGATTCATATCCATTGATGCAAAAGCTTAGACAAGTGTTGGTGGATCATGCCCTCAAAAATGGTGAAAAAGAAAGCAACCCAAGTGCTTCAATCTTTCAAAAGATCACAGCTTTTGAAGAGGAATTAAAAGCACTTTTGCCCAAAGAAGTGGAAAATGCAAGAATAGGAGTAGAGAATGGGAGCCCTGTGATTGAAAATCAAATTAAAGAATGTCGATCGTATCCATTGTACAAGTTCGTCAGAGAAACGTTGGGAACTCGGTTGTTGACCGGTGAGAACGACGTATCACCGGGAGAAGAATTCGATAAGGTTTTTTCGACCATTAGTGCTGGAAAATTGATAGATCCAATGCTTGAATGTTTACAAGATTGGATTTGTGCTCCACTTCCTCTTCATTAG | 2145 | 44.9 | MGSDKENGSVGRAEPGAFCGGVATYWNGAAEGLKGSHWEEFKRMVEEFRRPVVRLGGESLTIAQVAGIAAARGSEVAVELCETARPAVEASSKWVVESMSNGTDSYGITTGFGSTSHRRTDQGEDLQKELIRFLNAGIFGKDSNSCHTLPQPATRAAMVVRINTLLQGYSGIRFEILEAIAKFLNHNITPCLPLRGTITASGDLVPLSYIVGLLTGRPNSKAIGPNGESLSPIQAFHLAGISGGFFHLKPKEGLALVNGTAVGSGLASIVLFEANYLAILSEILSAVFVEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKTARKLHEIDPLHKPKQDRYALRTSPQWLGPQIEVIRHSTKMIEREINSVNDNPLIDVLRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLFASRNPSLDYGFKGAEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSTTYLVALCQAIDLRHMEKNLKKTVKNTVSQVAKKILVLHFNGNLHPIRYSEKDLLQAVDREQVFAYIDDPCSDSYPLMQKLRQVLVDHALKNGEKESNPSASIFQKITAFEEELKALLPKEVENARIGVENGSPVIENQIKECRSYPLYKFVRETLGTRLLTGENDVSPGEEFDKVFSTISAGKLIDPMLECLQDWICAPLPLH | 714 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7147840 | 7152681 | + | Tan0021317.1 | Tan11g0873 | 767810 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g0873 | 714 | FunFam | Phenylalanine ammonia-lyase | 261 | 542 | - | - | |
Tan11g0873 | 714 | PANTHER | HISTIDINE AMMONIA-LYASE | 24 | 713 | IPR001106 | GO:0016841(PANTHER)|GO:0045548(PANTHER) | |
Tan11g0873 | 714 | Pfam | Aromatic amino acid lyase | 60 | 541 | IPR001106 | - | |
Tan11g0873 | 714 | Gene3D | Fumarase/aspartase (Central domain) | 261 | 707 | - | - | |
Tan11g0873 | 714 | FunFam | Phenylalanine ammonia-lyase | 19 | 260 | - | - | |
Tan11g0873 | 714 | SUPERFAMILY | L-aspartase-like | 25 | 713 | IPR008948 | GO:0003824(InterPro) | |
Tan11g0873 | 714 | FunFam | Phenylalanine ammonia-lyase | 527 | 648 | - | - | |
Tan11g0873 | 714 | Gene3D | - | 527 | 648 | IPR023144 | - | |
Tan11g0873 | 714 | CDD | PAL-HAL | 58 | 524 | IPR001106 | - | |
Tan11g0873 | 714 | NCBIfam | phenylalanine ammonia-lyase | 26 | 704 | IPR005922 | GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro) | |
Tan11g0873 | 714 | Gene3D | - | 20 | 260 | IPR024083 | - | |
Tan11g0873 | 714 | ProSitePatterns | Phenylalanine and histidine ammonia-lyases signature. | 196 | 212 | IPR022313 | GO:0016841(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan10g1452 | Tan-Chr10:19872823 | Tan11g0873 | Tan-Chr11:7147840 | 0.00E+00 | dispersed | |
Tan10g1453 | Tan-Chr10:19921599 | Tan11g0873 | Tan-Chr11:7147840 | 2.90E-29 | dispersed | |
Tan10g1454 | Tan-Chr10:19922572 | Tan11g0873 | Tan-Chr11:7147840 | 1.90E-166 | dispersed | |
Tan11g0873 | Tan-Chr11:7147840 | Tan03g1079 | Tan-Chr3:67008633 | 0.00E+00 | wgd | |
Tan11g0873 | Tan-Chr11:7147840 | Tan04g0612 | Tan-Chr4:5167652 | 1.00E-277 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g0873 | K10775 | - | csv:101206890 | 1234.94 |