Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan11g0926 | ATGTTTGCAACCACTGGCATTCTGTTCTTCATTTGGCTTTTGAGCTCCTCTCTGCCTCCAATGGCTGCTTTCACTTTCAATCTCACTGTCCCACATCTTCTTCCAGATCCTGAAACTGTTGCTTATGAAGTTCAGAGGAGTGTGAATGAATCTTTTTCCAGAAGGCAAATGCTGTCAATTCATTCGAAAGGTCAATCAAATTCATGCCAAACCGGAAACCCTATTGATGATTGTTGGCGCTGCGACTCGAACTGGCAAGCCAATCGCCAACGGCTCGCCGATTGCGGCATTGGATTTGGCCGAGACGCCATGGGAGGCAAAGGAGGTCAGATCTATATAGTTACAGATTCCTCCGATTCCGACCCTGTAAACCCTCGCCCTGGAACTCTCCGCTACGCCGTGGTTCAAGACGAACCTCTCTGGATCGTCTTTGCCGCCGACATGACGATCAAACTCAAATACGAACTCATGATGAACAGTTACAAAACCCTAGATGGCCGCGGCGCTAACGTTCACATCACAGGCGGCGGCTGCATCACACTCCAATACATCTCGAATGTAATCATCCACAACATCAACATTCACCACTGTATCCCTACCGGCCACACCAATGTCCGATCGAGCCCTACGCACGTCGGATACAGAGGAAAGTCCGACGGCGACGGAATCTCGATCTTCAGCTCCCGCAACATCTGGATCGACCATTGCTCACTCTCGTACTGTACCGATGGATTAATCGACGCCATAATGGGATCGACCGGAATCACGATCTCGAACAACTACTTCTCGCACCACGACGAGGTGATGCTGCTAGGGCACGACGACGGCTTCTCGCCGGACTCGGGGATGCAGGTGACGATCGCGTTTAATTTGTTCGGCGAGAAGCTAGTTCAGCGGATGCCGCGGTGCCGGCGGGGGTATATTCACGTCGTCAACAACGATTTCCGATCGTGGGAGATGTACGCCATCGGCGGCAGCGGTGGTCCGACGATCAACAGCCAAGGGAATCGGTATATTGCTCCGGGGAATCCCAATGCAAAGGAGGTGACGAAGCGCGTGGACACAAACGCGGGGGACTGGTCGGAATGGAACTGGAGAACGGAGGGGGATATAATGGTAAATGGAGCTTTTTTTGTGCCGTCCGGCGAAGGACTCAGCAATATGTACGTTAAAGCTTCCAGTGTGGCGCCCAAATCCGCCGCTCTCGTCGACCAGCTCACTCTCAACGCCGGCGTCTTCGGCGGGCCCAGGGAGAGTAGACAGAGCAACTCGTATCCTGGAGACGAAAGCTCGTCCAGTTCGGGGTCCAGTGGCAGCGATGGCGGTGGCGACTACTTCGGGATGATATTCGGTGGGGGCGGGTTGAATAGTGCACCACCACCATCTCTTTCAGTTGTTAACATGATCATTCTTACCCTGCTTACTATTTTAGTTCTGTACACGAACTCAAACTATGATGCTTTCTTATCATTGACAACATTGTAG | 1485 | 52.32 | MFATTGILFFIWLLSSSLPPMAAFTFNLTVPHLLPDPETVAYEVQRSVNESFSRRQMLSIHSKGQSNSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYIVTDSSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFSPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNDFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGPRESRQSNSYPGDESSSSSGSSGSDGGGDYFGMIFGGGGLNSAPPPSLSVVNMIILTLLTILVLYTNSNYDAFLSLTTL | 494 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7527333 | 7533682 | - | Tan0012265.1 | Tan11g0926 | 767863 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan11g0926 | 494 | Gene3D | - | 72 | 414 | IPR012334 | - | |
Tan11g0926 | 494 | MobiDBLite | consensus disorder prediction | 413 | 439 | - | - | |
Tan11g0926 | 494 | MobiDBLite | consensus disorder prediction | 416 | 439 | - | - | |
Tan11g0926 | 494 | FunFam | Pectate lyase | 72 | 414 | - | - | |
Tan11g0926 | 494 | SUPERFAMILY | Pectin lyase-like | 73 | 412 | IPR011050 | - | |
Tan11g0926 | 494 | PRINTS | Pollen allergen Amb family signature | 119 | 144 | IPR018082 | - | |
Tan11g0926 | 494 | PRINTS | Pollen allergen Amb family signature | 363 | 387 | IPR018082 | - | |
Tan11g0926 | 494 | PRINTS | Pollen allergen Amb family signature | 95 | 112 | IPR018082 | - | |
Tan11g0926 | 494 | PRINTS | Pollen allergen Amb family signature | 155 | 171 | IPR018082 | - | |
Tan11g0926 | 494 | PRINTS | Pollen allergen Amb family signature | 392 | 415 | IPR018082 | - | |
Tan11g0926 | 494 | PRINTS | Pollen allergen Amb family signature | 299 | 318 | IPR018082 | - | |
Tan11g0926 | 494 | PRINTS | Pollen allergen Amb family signature | 219 | 240 | IPR018082 | - | |
Tan11g0926 | 494 | PRINTS | Pollen allergen Amb family signature | 321 | 340 | IPR018082 | - | |
Tan11g0926 | 494 | SMART | amb_all | 147 | 344 | IPR002022 | - | |
Tan11g0926 | 494 | Pfam | Pectate lyase | 155 | 324 | IPR002022 | - | |
Tan11g0926 | 494 | PANTHER | PECTATE LYASE 18-RELATED | 31 | 413 | IPR045032 | GO:0030570(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g0641 | Tan-Chr4:5411468 | Tan11g0926 | Tan-Chr11:7527333 | 1.40E-191 | dispersed | |
Tan11g0685 | Tan-Chr11:5943029 | Tan11g0926 | Tan-Chr11:7527333 | 8.50E-141 | dispersed | |
Tan03g1118 | Tan-Chr3:67304374 | Tan11g0926 | Tan-Chr11:7527333 | 4.50E-181 | transposed | |
Tan11g0926 | Tan-Chr11:7527333 | Tan04g0640 | Tan-Chr4:5408393 | 3.50E-189 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan11g0926 | K01728 | - | csv:101207535 | 868.996 |